Dvan014382.1
Basic Information
- Insect
- Dione vanillae
- Gene Symbol
- retn
- Assembly
- GCA_037178615.1
- Location
- JAZFAU010000182.1:390656-396768[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.6e-17 1.7e-13 51.7 0.1 29 89 4 62 1 62 0.93 2 2 3.9 1.4e+04 -2.5 0.0 25 38 188 201 152 202 0.57
Sequence Information
- Coding Sequence
- ATGGCAAAGTCAGTATTAGATCTATATGAGCTTTACAACTTGGTGATAGCTCGCGGAGGCCTCGTTGAAGTTATCAACAAGAAACTCTGGCAAGAGATCATTAAAGGCCTGCGACTCCCCTCGTCCATCACATCAGCCGCATTCACTTTACGCACACAatatatgaaatatttatacgacTACGAGTGCGAGAAGAAGAACTTGTCGACTAGGAGCGAGTTGGACGCGGCTATCGAGGGCAACAAGCGTGAGGGGCGTCGCGCCTCCGGACAGTACGATGCGCAGGCCGCCTTGGCCATGCCACCTTTGAACCGAGTGCCTGCGTCCCTCGCACAGTTGTCCCAACACATGCAGCCTCTGTCCCTCTCGCTAGGGGGCGGCGTGGCGGGAGTCCCCCGTCTACCCCCGCTGCCTCACGCCCCACATATATCGCAACACGACATCGAGTACCGTGTGAGGGAATATATGAAGATGATACAGCAACAACGGGATATGATTAGGAACGGATCAGAGTCACCGCCAGGAGCTCCAATGGTGTCTCCCAGAGACGCGGCGCTGTCGGCAATCGACGTGTCGCGACTTACTCTATGGTCACtatacaacaacaacaacaacagccCACAACCGGATTTGGAACCACAAcgCGAAGCCCTAAACCTAAGCGAGAGCCCCACGCTGCCCGGCAAGCGTGAGGCGTGCCGCTCCCCCCCGCCGCCCGCCAAGCGGCGCACCCCGCTGCCGCGCGCGCCGTCCCCCTCGCACGCGCGCTCCGAGCCGATCTCGCCGTCCCGctcgcacgcgcacgcgcatgTCAACGGGAGCGCCGCCAACGGGATCGGCGCTGCTTTCAAGATTACTACGAGAGGCGACGCAAACACAGGCGACCAACAACTAGTGAtggtttcttaa
- Protein Sequence
- MAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRVPASLAQLSQHMQPLSLSLGGGVAGVPRLPPLPHAPHISQHDIEYRVREYMKMIQQQRDMIRNGSESPPGAPMVSPRDAALSAIDVSRLTLWSLYNNNNNSPQPDLEPQREALNLSESPTLPGKREACRSPPPPAKRRTPLPRAPSPSHARSEPISPSRSHAHAHVNGSAANGIGAAFKITTRGDANTGDQQLVMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00418756; iTF_00457028; iTF_00722820; iTF_00246968; iTF_00159611; iTF_00775049; iTF_01403228; iTF_00621006; iTF_00780823;
- 90% Identity
- iTF_00457028;
- 80% Identity
- -