Fadi022447.1
Basic Information
- Insect
- Fabriciana adippe
- Gene Symbol
- retn
- Assembly
- GCA_905404265.1
- Location
- FR989998.1:5488298-5495141[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.5e-20 1.2e-16 61.4 0.0 10 89 23 100 14 100 0.89 2 2 6 1.3e+04 -2.8 0.0 25 38 227 240 192 241 0.57
Sequence Information
- Coding Sequence
- ATGAATAAAAAATCACATGAGAATATTAGAGGTGGTGAGGATAGACCCGGATTTTTAACAGGTTTTAGTTGGATTTCCAAGCGAGCACGTACACCAATCAATCGACTGCCCATCATGGCGAAGTCGGTGTTGGATCTGTACGAACTGTACAATCTGGTGATCGCTCGCGGTGGTCTTGTAGAGGTCATAAACAAGAAACTCTGGCAAGAGATCATCAAAGGCCTACGACTCCCTTCCTCCATCACTTCAGCCGCATTCACTTTACGCACACAATACATGAAATATTTATACGATTACGAGTGCGAGAAGAAGAACTTGTCGACTAGGAGCGAGTTGGACGCGGCTATCGAGGGCAACAAGCGTGAGGGACGCCGCGCCTCGGGACAGTACGATGCGCAGGCCGCGTTGGCCATGCCACCCCTTAACAGAGTGCCAGCGTCCCTCGCCCAGTTATCCCAGCACATGCAGCCCCTGTCCCTCTCGCTAGGGGGTGCGGTGGCGGGGGTGCCACGTCTGCCGCCCCTACCACCGCACGCGTCGCACATCTCACAACACGATATAGAGTACCGTGTCAGAGAATACATGAAGATGATACAGCAACAGCGTGAAATGATTAGGAATGGCTCAGAGTCTCCCCCGGGTGCTCCCATGGTGTCTCCTCGAGACGCGGCGCTTTCCGCCATCGACGTGTCGCGACTGACACTTTGGTCACTCTACAATAACAACAACAACAGCCCACAACCAGATCTTGAACCACAGCGTGAGGCACTAAACCTAAGCGAGAGTCCGAACTCCAGCGTCAGTGGCAAGCGGGAGGCCTGCCGCTCCCCTCCCCCGCCCGCTAAGCGGCGCACCCCGCGCCCGCCCTCCCCCGCCGCGCCCTCGCACACCTCCCCCCACTCCTCCCCACGCTCGCACGCGCACATGAACGGCAATGCCAATAGCAATGGCGTGCATGGTGCTGCGTTCAAGATTACTACGCGAGGTGATGCAAACACCGGCGATCAACAACTCGTGGTGTCTATCGAACTGAACGGAGTAACATACGAAGGCGTCCTCTTCCCCTCACAGAACGGCAACGGTCAGAATGGACATCGGCAAATGGTCTCCTAA
- Protein Sequence
- MNKKSHENIRGGEDRPGFLTGFSWISKRARTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRVPASLAQLSQHMQPLSLSLGGAVAGVPRLPPLPPHASHISQHDIEYRVREYMKMIQQQREMIRNGSESPPGAPMVSPRDAALSAIDVSRLTLWSLYNNNNNSPQPDLEPQREALNLSESPNSSVSGKREACRSPPPPAKRRTPRPPSPAAPSHTSPHSSPRSHAHMNGNANSNGVHGAAFKITTRGDANTGDQQLVVSIELNGVTYEGVLFPSQNGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00457796;
- 90% Identity
- iTF_00642129;
- 80% Identity
- -