Dchr014106.1
Basic Information
- Insect
- Danaus chrysippus
- Gene Symbol
- retn
- Assembly
- GCA_004959915.1
- Location
- RPCZ01000119.1:652616-656770[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.8e-17 8.2e-14 52.0 0.1 29 89 4 62 1 62 0.93 2 2 1.6 4.7e+03 -1.8 0.0 25 38 189 202 153 213 0.65
Sequence Information
- Coding Sequence
- ATGGCCAAGTCTGTTCTGGATCTGTACGAGCTGTACAACTTGGTGATCGCTCGCGGCGGTCTGGTGGAGGTCATCAATAAGAAGCTCTGGCAGGAGATCATCAAGGGTCTGAGACTTCCATCGTCCATCACGTCAGCCGCCTTCACTTTACGCACACAGTATATGAAGTATCTGTATGATTATGAGTGCGAGAAGAAGAACCTGTCAACCAGGAGTGAGTTGGACGCAGCTATAGAAGGCAACAAGAGGGAGGGACGTCGCGCCTCGGGACAGTATGATGCGCAGGCGGCTCTAGCTATGCCTCCTCTCAATAGAGTTCCAGCATCCCTGGCCCAGTTATCCCAGCACATGCAGCCGTTGTCTCTGTCGTTAGCCGGCGGGGTAGCGGGGGTTCCCCGCTTGCCCCCCCTCCCGCCACACGCCCCCCACATATCACAACACGACATAGAGTACCGCGTGAGGGAGTACATGAAGATGATACAGCAACAGCGCGAACTGATCAGGAACGGGTCGGAGTCTCCGCCGGGCGCGCCGATGGTGTCTCCTCGTGACGCGGCCTTGTCCGCTATCGACGTGTCCCGCCTCACGCTGTGGTCACTctacaacaacaacaacaacaacaacagcCCGCAGCCCGAGATAGAACCACAACGCGAGGCGTTGAACCTCAGTGAGAGTCCGACCGGTATAAGCATCAAGCGCGAGGCGTGCCGCAGCCCCCCTCCCCCCGCCAAGAGGCGCACCCCGCGGCCCCCCTCCCGCAGCCCGCCGCCCGCNATATGTTATAAAGTAAGCACactacttaataaatatcgtGGTGTGGAGTAA
- Protein Sequence
- MAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRVPASLAQLSQHMQPLSLSLAGGVAGVPRLPPLPPHAPHISQHDIEYRVREYMKMIQQQRELIRNGSESPPGAPMVSPRDAALSAIDVSRLTLWSLYNNNNNNNSPQPEIEPQREALNLSESPTGISIKREACRSPPPPAKRRTPRPPSRSPPPAICYKVSTLLNKYRGVE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00457796;
- 90% Identity
- -
- 80% Identity
- -