Druf089913.1
Basic Information
- Insect
- Dioctria rufipes
- Gene Symbol
- sip1
- Assembly
- GCA_963924295.1
- Location
- OZ002744.1:2544231-2547679[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5e-93 2.9e-88 298.7 13.5 2 275 398 663 397 663 0.98 2 2 0.0084 4.8e+02 2.8 0.3 244 270 677 703 664 708 0.80
Sequence Information
- Coding Sequence
- ATGTCAGATAATGAGTACGAGAGGTTTGAAATAACAGACTATGATTTGGCTAATGAATTCAATCCTAATCGACCTCGAAGAAAACAGACAAAACACCAGCAAATTTATGGAATTTGGGCGGATGATAGtgaaaatgaggaagaagaacaTTATTCTAGGCGACGAGGAAGAAAAACGAAAGACTATTCCGCTCCCGTAAGTTTTGTTGCAGGAGGGGTTCAGCAGGCCGGAAAAAAGGACGACGACGAAGAAGATGAGGAAGAGGACGATACTCAAATTACTGATGAAGAAGATGAGCGTCCATCGTTCGGCAAAAAGCAAATTGAAAAGGCCAGCTCATCATCCGAAACGGAGTCAGAGCCGGAACCACCACCTCAACCGAAAATGTTTTCTAGAAATGCTGGATTTGGTAGCGGCCAGAATAGACCATCTAATGTGTCTAGTGCTTCTTTGGGAAAATGGGAAGCACATACAAAGGGTATAGGAGCAAAATTGCTGCTTCAAATGGGTTATAAGCCTGGAAAAGGCTTGGGGAAGGATCTTCAAGGGATAGCTCAACCAGTAGAAGCTCATATAAGGAAAGGAAGAGGAGCCATAGGCGCTTATGGACCAGAAAAGCTTGCAAGTACTCCAAGTCTAAAACTGCAACAACACATTGATGAAGATGAGCGCGAGTCTAAAGAATTTAAGGATAAAATGAATATGTGGAAAAAAGATGGAAAACcggaaaaaagtaagaaaaatcgTTATTACTATCGGAGTGTTGAAGAAGTCATCGAAAAAGGAAAGAGATCAAACAGTTTAAAAGACAAATTCAGCAATAAATTAAGTAACGTAACAGTTATTGACATGACTGGTCCCGAAAAACGAGTGCTCAGCGGTTATCACGCCCTTGGTCAGACAAAGGTCATGGACGAAGATCTTTACGAACATAGGCAGGCAAAGAAATGCATAAATTTTACTTTACCCGAGCTAATGCACAATTTAAACTTGATCGTGGACATGTGTGAGCAGGAAATCATTTCCATTGATAAGGTAGAAAGGGAATCAGACGGTAAACAAAAGCAATTTGAGCACGAAAAAGAGAATTTGCGAAAAATTGTGAAGCTTGAAAATGACCATATCGATACTTTGGAAAATGCCCTTGAGCTTGTAGAGTCCTTGACAAATCCTGAAGATGAATTAACTCTTGCCAAAgctgaaaaaatttttattcggttGCAAACAGATTTTTCAGCGGAATATAAAGAATTTGGTTTGGGCGATTTAGCGGCTGGAGTCATAGCACCGCTGGTTAATCAAGAACTCAGTAGTTGGAAACCTTTAGAAGAGCCCACTAATTTTGTGGAGGCTATAAAGAAGTGGAGATCTATTTTAGGAATGCATCAGTCCCAGACTAGGAACGTTTTTGATCCGTATTCCTCACTGGTTTGGGCTGGTGTTATTCCCAGTTTTCGTGCAGCAGCTGCAGAATGGAATCCTAAGGTACATCAACCAATGGCTGCTTTGTTAGATGCTTGGGCGCCTCTTCTACCAACTTGGGTACTTGATAATGTTTTGGAGCAAGTGATTTTGCTTAGACTTTCAGCCGCCGTTCAAGTTTGGGATCCACTTACTGATACGGTGCCAATTCACGTTTGGATTCTTCCCTGGAGTGGGATTTTGGGTCATAAAATGGAGGAATTTGTTTACCCAATGATTCGTGAAAAACTTGGAAATGCTCTACAAGCTTGGGTACCACAAGACAGGTCAGCAAGACTTATGATAACTCCATGGAAAGCTGCATTTGCAGACGGAGATATGCAAAGTTTTTTGCTTAAACATATTGTACCAAAGTTGCAAGCTACGCTGTCTGAAATGATTATAAACCCACTCCAACAAGATTTGGAACCGTGGAATCAAGTATGGGAATGGAACGAACTTATTTCTCCAATTATAATGACTCAAATGTTGGATAAGTTCTTCTTCCCAAAGTGGACGCAAACTTTAGTAATTTGGTTAAATCAGCAACCAAATCTGGATCAAATTTCCCGATGGTATACTGGGTGGAAAAATTTACTTTCCGATGAAGTATTGCAACAAATAAATACCAAAGAACATTTCCGCCGAGCATTGGAACTTATGCATCGTGCTACAGCTGTAGCTGCTGCTGCAGCTGCTGCTATTCCTGTTCCAGAAGTACCATTAGTTCAACCACAGCCTCAACCTCAGGCTCAGCCGCAGCCCCAGCCACAGCCACAGCCGCAGCCACAGGCTCAGACCCAGTCGCAGCACCAATCTGTTTTACATCCACCAGCATTGATGGACTTACAAATCCCACCTCCTCCGCAACTTGAATTTAAGGAGCTTGTGTCGCAGCGGTGCGCTGAACGAGGTATTATTTTTGCACCTATGCCTGGTCGAAGAGAATTCGGGAAACAAGTGTACAGAGCGGGAAAACTGTTTTGCTACATAGATCGTGCTGTTCTTATGGTAAGTGATGGAAGTTTTACAAGTTGGACACCGACATCTCTAGGATTGCTTTTAGAAAGAGCCGTCAGTGGTTGA
- Protein Sequence
- MSDNEYERFEITDYDLANEFNPNRPRRKQTKHQQIYGIWADDSENEEEEHYSRRRGRKTKDYSAPVSFVAGGVQQAGKKDDDEEDEEEDDTQITDEEDERPSFGKKQIEKASSSSETESEPEPPPQPKMFSRNAGFGSGQNRPSNVSSASLGKWEAHTKGIGAKLLLQMGYKPGKGLGKDLQGIAQPVEAHIRKGRGAIGAYGPEKLASTPSLKLQQHIDEDERESKEFKDKMNMWKKDGKPEKSKKNRYYYRSVEEVIEKGKRSNSLKDKFSNKLSNVTVIDMTGPEKRVLSGYHALGQTKVMDEDLYEHRQAKKCINFTLPELMHNLNLIVDMCEQEIISIDKVERESDGKQKQFEHEKENLRKIVKLENDHIDTLENALELVESLTNPEDELTLAKAEKIFIRLQTDFSAEYKEFGLGDLAAGVIAPLVNQELSSWKPLEEPTNFVEAIKKWRSILGMHQSQTRNVFDPYSSLVWAGVIPSFRAAAAEWNPKVHQPMAALLDAWAPLLPTWVLDNVLEQVILLRLSAAVQVWDPLTDTVPIHVWILPWSGILGHKMEEFVYPMIREKLGNALQAWVPQDRSARLMITPWKAAFADGDMQSFLLKHIVPKLQATLSEMIINPLQQDLEPWNQVWEWNELISPIIMTQMLDKFFFPKWTQTLVIWLNQQPNLDQISRWYTGWKNLLSDEVLQQINTKEHFRRALELMHRATAVAAAAAAAIPVPEVPLVQPQPQPQAQPQPQPQPQPQPQAQTQSQHQSVLHPPALMDLQIPPPPQLEFKELVSQRCAERGIIFAPMPGRREFGKQVYRAGKLFCYIDRAVLMVSDGSFTSWTPTSLGLLLERAVSG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01256405;
- 90% Identity
- iTF_00453493;
- 80% Identity
- -