Dlon004281.1
Basic Information
- Insect
- Diachasmimorpha longicaudata
- Gene Symbol
- lola_1
- Assembly
- GCA_034640455.1
- Location
- CM067949.1:8343219-8346291[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.1e-16 5.4e-13 48.5 0.0 2 42 373 414 372 417 0.94 2 2 2.4 3.2e+03 -2.0 0.0 30 42 417 430 416 431 0.82
Sequence Information
- Coding Sequence
- ATGTCGATGCAACAATTCTGCCTTCGTTGGAATCATCATCAACCGAATTTCATATCTGTTTTTTCAACTCTCTTGAGCAATGAGACTCTAGTTGATGTGACGCTTGCAGCTGAAGGGAGACACTTGCAGGCACATAAAGTAGTGTTGTCAGCTTGCAGCACGTACTTTCAGTCACTATTTACGGTCAATCCATGCCAACATCCTATTGTTATACTGAAGGATGTGAAATTCTCAGATCTCAAGATTATGGTGGATTTTATGTACTATGGGGAGGTCAATGTTTCTCAGGATCAATTGCCATCTATTATTAAGACTGCGGAGAGTTTAAAGATCAAAGGTCTCGCCGAGATGCACACAGCGTCATTAACGAAGTGGCCAAGCGGTAGTTCAGAGCCGAGCGATGGAAACAGGGGTGAATCTTGCTCACCTAGTTCATCACCAATGTCACCATCCTACAGGAGAAAGCGATTGAGGAAGACGTCAACTGGTTCCACGTCTGGATCAGGAGACAAACAGGAGGAAGTCAGTGAAATAACTCTTGTTGCTACGAATATCGTCAAACCGGAGCCACTCATTATGACACAAGAGAGTGGTGAGAATTTGAGGCGTCCTATTAATACCAACACTGAGTCACAGGGGAGTATCGATGAGGATCAAATATCAATTatGAGCAACATGGAGAGCAGTACAGCAACGACACCCGCCCAAAGTGAGACTTCCATGCAGGACGTGAGTCAGCAATCAGGGACAAATGTACAGAGTTCATTATCATCAGGGCAGACATCAGCACATCAAGGATTGCAATGGACAATCATGGAGCACACGTATCCACGTTTCGCTCTATCCTCGTGTCAAACGAATCTGTCGATTCAAGCATCATCGGCATTCACAACCCCCGAAATAACAGCATCATCGAGCATCAATGATCAGTATCCTGGTACAAATACCCCAGGCTCGAGTTGTGCATTAACGAATTATACGAGTCCAACTCATGGAGGACTGCAGCCATCGTCAAGTGGTCCATCGCCATCGGGACAGTGTACAAATACATGTCAGAGTCCTTGTGCTAGTCCACAAGCAACAGTCAAGAGAAAGAGATCGACAAATCCCCAGGCAGATGAGAATTTCATCAGGGCTTTGGATGCCGTTCGTTATGGGGGCATTGGTTTTTGCAAAGCGGCAAGAATGTTTGGAGTTAATAATCGAACACTGTGGCTCGAGTACAAGAAGAGGGGCTATCCCAATAATCGTCCAAGTCTCAAGTCCAGGGTCAAACAGGAGGCACCCACTTCACCACCACCAGCGCCAACATCACAGCCTGTTAACTCACAAAGTCCTACACCAATGGGACCTCCTAGCACTCCTCACAGCACACATAATACTCTCAATACTCACACCATGCTCACTGCACACAGTCCACACATGCTCAGCAGCTATGTGGATACCAGGCATAATGATTACTCATTGCCCAATACTAATATGCCCATTAATTTACATGGAGTTAATTACAATGCCATGTGA
- Protein Sequence
- MSMQQFCLRWNHHQPNFISVFSTLLSNETLVDVTLAAEGRHLQAHKVVLSACSTYFQSLFTVNPCQHPIVILKDVKFSDLKIMVDFMYYGEVNVSQDQLPSIIKTAESLKIKGLAEMHTASLTKWPSGSSEPSDGNRGESCSPSSSPMSPSYRRKRLRKTSTGSTSGSGDKQEEVSEITLVATNIVKPEPLIMTQESGENLRRPINTNTESQGSIDEDQISIMSNMESSTATTPAQSETSMQDVSQQSGTNVQSSLSSGQTSAHQGLQWTIMEHTYPRFALSSCQTNLSIQASSAFTTPEITASSSINDQYPGTNTPGSSCALTNYTSPTHGGLQPSSSGPSPSGQCTNTCQSPCASPQATVKRKRSTNPQADENFIRALDAVRYGGIGFCKAARMFGVNNRTLWLEYKKRGYPNNRPSLKSRVKQEAPTSPPPAPTSQPVNSQSPTPMGPPSTPHSTHNTLNTHTMLTAHSPHMLSSYVDTRHNDYSLPNTNMPINLHGVNYNAM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00438849; iTF_01273702; iTF_01273015; iTF_01273880; iTF_01273184; iTF_00351221; iTF_00350922; iTF_00048064; iTF_00047885;
- 90% Identity
- iTF_01273702;
- 80% Identity
- iTF_00438849;