Ates006157.1
Basic Information
- Insect
- Aleiodes testaceus
- Gene Symbol
- lola
- Assembly
- GCA_963565655.1
- Location
- OY751416.1:5618846-5621473[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.3e-16 5.8e-13 48.4 0.0 2 42 378 419 377 422 0.94 2 2 1.9 3.4e+03 -2.0 0.0 30 42 422 435 421 436 0.82
Sequence Information
- Coding Sequence
- ATGTCGATGCAACAATTTTGCCTAAGATGGAACAATCATCAGCCAAATTTCATATCAGTTTTCTCAACATTATTGAGTAATGAGACACTGGTTGATGTGACACTTGCTGCTGAAGGTAGACACTTGCAAGCCCACAAAGTTGTATTATCAGCATGTAGCACATATTTTCAGTCATTGTTTACTGTTAATCCATGCCAACATCCAATTGTTATACTCAAGGATGTTAAATTTTCTGATCTCAAAATTATGGTGGATTTTATGTATTATGGAGAAGTTAATGTGTCACAGGATCAGTTGCCATCGATTATTAAGacTGCTGAGAGCTTGAAGATAAAAGGCCTCGCCGAAATGCACACAGCATCGTTAACAAAATGGCCAAGTGTTAGCTCTGAGCCAAGTGATGGTAATCGTGGTGAGTCATGCTCACCTTCTCCATCACCAATGTCACCGTCATACAGGAGAAAACGATTAAGGAAAAACTCGACTGGCTCTACATCTGGATCTGGTGATAAACCAGAGGAAATCAATGAGATAACACTTGTAGCAACTAATATTGTTAAACCAGAGCCATTAATTGTGACACAAGACAGTGGTGAGAATTTGAGGCGTCCTATTAATACTAGTACTGAATCGCAGGGCAGTATTGATGAGGATCAAATATCTATTATGAGCAATATGGAGAGCAGTTCTGCTACAACACCAGCACAAAGTGAGGGCTCGATGCAGGATGTCAGTCAGCAatcagcgacgaatgttggaCAAAGTACATTATCAACGGGACAGGCTCCATCGCATCAAGGATTGCAATGGACAATCATGGAGCACACGTATCCACGTTTCGCTCTATCCTCGTGTCAAACGAATCTGTCGATTCAAGCATCATCAGCATTTACAACCCCTGAAATAACAGCACCATCTCCAATCAACGAACAGTATCCAACAAATACACAGGGTTCAAGTTgtgcattaaataattatacaaGTCCAACACACAGTGGATTACAACAGGCAacaggtggtggtggtggcggtggtcCATCGCCATCTGGACAGTGTCAGAATACGTGCCAAAGCCCGTGTGCAAGTCCTCAGGCAACTGTCAAGAGAAAGAGATCAACGAATCCGCAGGcagatgaaaatttcatacgTGCGCTTGATGCTGTACGTTACGGAGGAATTGGTTTCTGCAAAGCAGCAAGAATGTTCGGGGTGAACAATCGTACACTGTGGCTCGAGTACAAGAAACGTGGCTATCCGAATAATCGGCCGAGCTTGAAATCCCGGGTGAAACAAGAAGCACCAACATCACCACCACCTTCGACACAATCACAGACAGTTAATTCACAGAGTCCAACTCCAATGGGACCACCAACAACACCACACACAACACATAATACACTGAATACACATACAATGCTCACTGCACACAGTCCACATATGCTTAGTAGTTATGTTGATACTAGACACACTGATTACTCATTACCAAATACAAGTATGCCAATTAATCTACATGGTGTTAATTACAATGCCATGTGA
- Protein Sequence
- MSMQQFCLRWNNHQPNFISVFSTLLSNETLVDVTLAAEGRHLQAHKVVLSACSTYFQSLFTVNPCQHPIVILKDVKFSDLKIMVDFMYYGEVNVSQDQLPSIIKTAESLKIKGLAEMHTASLTKWPSVSSEPSDGNRGESCSPSPSPMSPSYRRKRLRKNSTGSTSGSGDKPEEINEITLVATNIVKPEPLIVTQDSGENLRRPINTSTESQGSIDEDQISIMSNMESSSATTPAQSEGSMQDVSQQSATNVGQSTLSTGQAPSHQGLQWTIMEHTYPRFALSSCQTNLSIQASSAFTTPEITAPSPINEQYPTNTQGSSCALNNYTSPTHSGLQQATGGGGGGGPSPSGQCQNTCQSPCASPQATVKRKRSTNPQADENFIRALDAVRYGGIGFCKAARMFGVNNRTLWLEYKKRGYPNNRPSLKSRVKQEAPTSPPPSTQSQTVNSQSPTPMGPPTTPHTTHNTLNTHTMLTAHSPHMLSSYVDTRHTDYSLPNTSMPINLHGVNYNAM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00438673;
- 90% Identity
- iTF_01273702;
- 80% Identity
- iTF_00048064;