Dalb017218.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Dermolepida albohirtum
Gene Symbol
tfip11
Assembly
GCA_031893035.1
Location
JAVIWB010003091.1:41353-60408[+]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.6e-97 7e-93 312.3 10.6 1 275 398 669 398 669 0.97
2 2 0.46 8.9e+03 -2.9 0.1 245 270 684 709 675 714 0.61

Sequence Information

Coding Sequence
ATGTCGGACGATGAAGTAGAGAAATTCGAAATAACTGATTATGAtcttgaaaatgaatttaatattaacagaCCACGACGTAGGCCTACTAAACACCAACAAATATATGGTATATGGGCTGATGATAGTGATGGAGAAGAAGAAACTAAACCATCATTTCGAACCAGGCAACCCAAAAGTTACACTGCTCCAATAGGTTTTGTGGCTGGTGGCATTCAACAAGcgggaaagaaaaacgaaaacaatgttgaaataaaaaaggaaagtgATGAGTCTGAAAATGAAGGACCATCAACTTCATTTAAATTACAGAATAGTTCCAGTGATTCAGAAACAGAAACCCTTCCTCGCTCAgGTTTTGGGATACATAAAGGTCCAACAAATGCAACCATAACAGAGATAACTGGTGATATTGCTGGGTTAAGGAATAAACGCGCACCAGTTAACAGTATGTTAATTAATCAAGGTGTGGGAAATTGGGAAAAGCACACGAAAGGAATCGGTGCAAAACTACTCCTACAAATGGGTTTTCAACCAGGAAAGGGTCTTGGCAAAGATTTACAGGGTATATCGACCCCAGTAGAAGCACGTATCAGGAAAGGACGTGGTGCAATTGGAGCATATGGAGCAGAAAATATACCTAGTATACCAATTAAAAAGgatAAAGCTGAAAAAATTGACGCGGAGAATTCCGAAAATGAATCGAAATGGAAGAAAAACGATTTGTCCAATAAGAAAACGAGATATTACTATAGAAGTGTCGATGATGTTATTGAAAAAGGTAAACGTCCAGGAGCTTATAGAAATTCTGGACCTACAagTGAGCTGAGTAAAGTGAAAGTCATTGATATGACTGGTCCACAGCAGCGTGTTTTAAGTGGCTACCATGCATTAAGTGGTCTGAAAGCGCCCCCTGGTATTGAAAGATTtgaagatgttgttcacaaaaAGTGTGTTAACTTTGCATTACCTGAAATACAACATAATTTGGATGTATTGGTCGACTTGTGTGAGCAGGATATTATTAGAATTGACAGAAATTCAAGACATAACCAAGATAAATTAATCGCACTTAAACAAGACGAAATCACactgaaaaatgtaataactaaAGAAGAAACTCTGATTGACAATTTAAATTCTGTCTTGGAAATCGTTAACAAACTCACAGATCCTACTTTAGGTTTGTCACTGGGCCAAGTGGCCAATATTTTCATGGACCTTCAGGAGAATCACTACGAAGAATACTTTCAATATGAGCTGGGTGAATTAGCTCCCGGTCTCGTGGGGCCTCTGTTGACGTCCGCCCTGGCTAGTTGGTCCCCACTAAACGCCCCTTCTCAATACACGGACGTTTTCGGTCAATGGAAGGACATCCTGGAGAAGCCGATGCAACGTGGGACACTAGAAGGTAATAGTATGGGAATACAGCCGTATGATAGTCTCTTATGGCACACTTGGGTGCCGGTTATCAGATCGTGCGTTAGTACTTGGAATCCCCGCGATTGTGACCCACTGATAAATCTCCTGGAGAAATGGAAACCACTGCTTTCACCCTGGGTACTGGACAATGCCCTAGACCAGCTGGTCATGCCCCGTTTAACAGCGGAAGTGACAAATTGGGATCCCCTGACGGACACCATACCAATACACACCTGGGTACATCCCTGGATTCCACTTTTAGATGTCCGATTACAGACCAGTATTTATCCgataatacaagaaaaattagGTGTAGCGCTCACGAACTGGCATCCATCAGATGGATCTGCAAAATTAATGCTGAAACCCTGGCAAAGAGTTTTACCAGAAGGCTCATTTTTCGCTTTTCTAATCAAACATGTAGTCCCCAAACTTCAGTTGTGTATGCAGTCGTTAGTTATAAATCCACATCAGCAACCTCTAGaaCCTTGGCACTGGGTGATGGAATGGAATGACATGTTATCTGTCGGAAGTATGACATTGATATTGGATAAATTTTTCTTCCCGAGGTGGTTACAAACATTGGCAATGTGGTTGAACCATAACCCGGATTACTCACAGGTTACAGAGTGGTATTCAGGATGGAAAAGGATGATGTCCGAACCGTTACTTGCTCAGCCTACAATTAAAGATAACTTCCACAAAGCCTTAGAAATGATGAATAGAGCCGTGTGTACAGGCCAACAACCAGGTGCGAAAGAATCAGTTTCATACTTGACAAACATAGAAACGAATATGCCGCCTCCACCTCCACCACCTCGAATCGAAAACTTAGCAGAGGCTGTGCGCACAGCGACGCAAATACTGCAAGGCTTCAAAGATCTGATAGCCAAAAGATGCGAAGAACGTGGCATACTTTTCGTGCCAATTCCAAACAAGTACCACGAAGCGAAACAAGTTTATAGACTAGGTATGAACGGAGTGCAGTGTTACATCGATCGAAACGTTGTCTTTTACACTCAAAATAATTCCACATGGCTGCCGACCTCCCTGAACAGACTGCTTGATATggcataa
Protein Sequence
MSDDEVEKFEITDYDLENEFNINRPRRRPTKHQQIYGIWADDSDGEEETKPSFRTRQPKSYTAPIGFVAGGIQQAGKKNENNVEIKKESDESENEGPSTSFKLQNSSSDSETETLPRSGFGIHKGPTNATITEITGDIAGLRNKRAPVNSMLINQGVGNWEKHTKGIGAKLLLQMGFQPGKGLGKDLQGISTPVEARIRKGRGAIGAYGAENIPSIPIKKDKAEKIDAENSENESKWKKNDLSNKKTRYYYRSVDDVIEKGKRPGAYRNSGPTSELSKVKVIDMTGPQQRVLSGYHALSGLKAPPGIERFEDVVHKKCVNFALPEIQHNLDVLVDLCEQDIIRIDRNSRHNQDKLIALKQDEITLKNVITKEETLIDNLNSVLEIVNKLTDPTLGLSLGQVANIFMDLQENHYEEYFQYELGELAPGLVGPLLTSALASWSPLNAPSQYTDVFGQWKDILEKPMQRGTLEGNSMGIQPYDSLLWHTWVPVIRSCVSTWNPRDCDPLINLLEKWKPLLSPWVLDNALDQLVMPRLTAEVTNWDPLTDTIPIHTWVHPWIPLLDVRLQTSIYPIIQEKLGVALTNWHPSDGSAKLMLKPWQRVLPEGSFFAFLIKHVVPKLQLCMQSLVINPHQQPLEPWHWVMEWNDMLSVGSMTLILDKFFFPRWLQTLAMWLNHNPDYSQVTEWYSGWKRMMSEPLLAQPTIKDNFHKALEMMNRAVCTGQQPGAKESVSYLTNIETNMPPPPPPPRIENLAEAVRTATQILQGFKDLIAKRCEERGILFVPIPNKYHEAKQVYRLGMNGVQCYIDRNVVFYTQNNSTWLPTSLNRLLDMA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00464857;
90% Identity
iTF_00068046;
80% Identity
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