Asol082605.1
Basic Information
- Insect
- Amphimallon solstitiale
- Gene Symbol
- tfip11
- Assembly
- GCA_963170755.1
- Location
- OY720678.1:119876721-119908288[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.1e-97 2.4e-92 312.7 10.5 1 275 399 670 399 670 0.97 2 2 0.32 1.9e+04 -1.9 0.1 245 270 685 710 675 718 0.54
Sequence Information
- Coding Sequence
- ATGTCAGACAATGAAGtagaaaaatttgaaataacAGATTATGATATTGAAAATGAATTTAACATTAACAGACCACGACGTAGGCTTACCAAAAATCAACAGATATATGGTATATGGGCTGATGATAGTGATGGTGAAGATGACAATAGGCCATCATTTCGAACTAAACAACCTAAAAGTTATAGTGCTCCTATAGGATTTGTAGCTGGAGGCATACAACAAGCGGGAAAGAAAGATGAAAACAATTCAGATGTCAAACAAGAAAGTGATGAGTCTGAAAATGAGGGGCCTTCGACTTCATTCAAACAAAAAAATAGCTCTAGTGACTCAGAGCCAGAAAATTTTCCTCGTAcagGTTTTGGAGGACTCAAAGGACCTACAAACGCAACTATGACAGAAATTACTGGCGATATTGCCGGTTTAAGGAATAAGCGTACGCCTGTTAATAGCACCTTAATTAATCAAGGTGTAGGAAATTGGGAAAAACATACAAAAGGAATTGGTGCAAAACTACTATTACAAATGGGTTTCCAACCAGGGAAAGGTCTTGGTAAAGATTTACAAGGTATATCGACACCAGTGGAAGCACGTGTTAGAAAAGGTCGTGGCGCAATAGGAGCTTATGGAGCAGAAAATATACCAAGTATTCCAATTAAAAAtgtagATAAGAATGAAAAAATTGATGTGGACAATTCCGAAAATGAATCAAAATGGAAGAAAAATGATTTGGCCAATAAGAAAACAAGATATTACTACAGAAGTGTCGATGATGTTATTGAAAAAGGTAAACGTCCAGGAGCTTATAGAAATTGTGGACCTACAAGTGAGCTGAGTAAAGTAAAAGTGATTGACATGACTGGTCCCCAGCAACGCATTTTGAGCGGATATCATGCATTGAGTGGTTTAAAAGCCCCTCCTGGTGTCGAAAGATTTGAAGATGTTGTTcataaaaaatgtattaattttgCGTTACCAGAAATACAACATAATTTGGATATATTAGTTGATTTGTGTGAACAGGATATTATTAGAATTGATAGGAATTCAAGATACAATCAAGATAGATTACTTGCATCAAAACATGATGAGATTACactcaaaaatttaataaacaaagaAGAAAAACTGATTGACAATTTAAATGATGTACTAGAAGTAGTTAACAAACTCATGGATCCCCGTCTAGGTTTATCACTGGGTCAAGTGGCCAACATTTTTCTGGATCTTCAGGAGAATCATTATGAAGAGTATTGTCAATATGAACTTGGTGAATTGGCTCCTGGACTTGTTGGACCTCTATTAACGTCCGCTCTGGCTAGTTGGTCCCCGCTGAACGCTCCCTCTCAGTACACGGACGTCTTTGGCCAATGGAAGGATATCCTGCAGAAGCCGTTACAACGTGGGACACTAGAAGGTAATAGTATGGGAATTCAGCCGTATGATAGTCTCTTATGGCACACTTGGGTGCCTGTTATCAGATCGTGTGTTAGCACATGGAACCCTCGTGACTGTGACCCGTTAATCAATTTACTAGAGAAGTGGAAACCACTGCTGACGCCCTGGGTTATGGACAACGTCTTGGACCAGCTTGTCATGCCGCGTTTAACTACAGAAGTCACAAATTGGGATCCACTCACAGATACGATACCAATACACACTTGGGTACATCCATGGATCCCACTTTtagatGTAAGACTGCAAGCGAATGTGTATCCTATAATACAAGAAAAATTGGGAGTGGCACTGACGAATTGGCATCCTTCTGATGGATCTGCAAAATTAATGTTGAAACCATGGCAACGAGTATTACCGGAAGGATCATTCTTCGCTTTTCTAATTAAACATGTAGTTCCCAAACTTCAATTGTGTATGCAATCACTAGTTATAAATCCACATCAACAGCCTTTGGAACCGTGGCATTGGGTAATGGAGTGGAGCGATATGTTATCGATCGGGAGTATGACATTAATATTAGATAAATTCTTCTTCCCACGATGGCTACAAACATTAGCAATGTGGCTGAATCATAATCCAGATTATTCTCAAGTAACAGAATGGTATTCAGGATGGAAAAGGATGATGTCAGAACAATTACTTGCACAGCCAACAATTAAAGatAATTTCCATAAAGCCTTAGAAATGATGAACAGGGCTGTATGTACCGGACAACAACCGGGAGCAAAGGAATCAGtatcctatttgacaaatatagaaaCCAATTTACCACCGCCTCCTCCACCGCCACGAATCGAAAACTTAGCAGAGGCAGTGCGTACAGCGACTCAAATACTTCAAGGTTTTAAAGATCTGATAGCGAAAAGGTGCGAAGAACGTGGTATACTTTTTGTACCTATTCCCAACAAATACCACGAAGCGAAACAAGTTTATAGACTGGGTTCGAATGGAGTACAGTGTTATATCGATAGGAACGTTGTCTTTTATACTCAGAATAATTCAACATGGCTACCTACTTCCTTAAATAGACTACTGGATATGGCATAa
- Protein Sequence
- MSDNEVEKFEITDYDIENEFNINRPRRRLTKNQQIYGIWADDSDGEDDNRPSFRTKQPKSYSAPIGFVAGGIQQAGKKDENNSDVKQESDESENEGPSTSFKQKNSSSDSEPENFPRTGFGGLKGPTNATMTEITGDIAGLRNKRTPVNSTLINQGVGNWEKHTKGIGAKLLLQMGFQPGKGLGKDLQGISTPVEARVRKGRGAIGAYGAENIPSIPIKNVDKNEKIDVDNSENESKWKKNDLANKKTRYYYRSVDDVIEKGKRPGAYRNCGPTSELSKVKVIDMTGPQQRILSGYHALSGLKAPPGVERFEDVVHKKCINFALPEIQHNLDILVDLCEQDIIRIDRNSRYNQDRLLASKHDEITLKNLINKEEKLIDNLNDVLEVVNKLMDPRLGLSLGQVANIFLDLQENHYEEYCQYELGELAPGLVGPLLTSALASWSPLNAPSQYTDVFGQWKDILQKPLQRGTLEGNSMGIQPYDSLLWHTWVPVIRSCVSTWNPRDCDPLINLLEKWKPLLTPWVMDNVLDQLVMPRLTTEVTNWDPLTDTIPIHTWVHPWIPLLDVRLQANVYPIIQEKLGVALTNWHPSDGSAKLMLKPWQRVLPEGSFFAFLIKHVVPKLQLCMQSLVINPHQQPLEPWHWVMEWSDMLSIGSMTLILDKFFFPRWLQTLAMWLNHNPDYSQVTEWYSGWKRMMSEQLLAQPTIKDNFHKALEMMNRAVCTGQQPGAKESVSYLTNIETNLPPPPPPPRIENLAEAVRTATQILQGFKDLIAKRCEERGILFVPIPNKYHEAKQVYRLGSNGVQCYIDRNVVFYTQNNSTWLPTSLNRLLDMA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00464857;
- 90% Identity
- iTF_00434113;
- 80% Identity
- -