Ecor002812.1
Basic Information
- Insect
- Electrophaes corylata
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_947095575.1
- Location
- OX352702.1:13294336-13299722[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.3e-70 1.4e-65 221.6 17.4 1 268 14 271 14 293 0.89 2 2 0.22 4.3e+03 -3.2 8.8 125 170 315 360 306 369 0.55
Sequence Information
- Coding Sequence
- ATGTCGTTCCGTCATTTGTCGAATTCTAGTGAGAATACGGCAGAACAGCGTCTGGCTGCGCGGCGGGCAGCGCGAGCTGAGGCCAGAGATATCCGCATGAGAGAGCTGGAGAGACAGCAACGGGAACAAGAGGACCATGCTGACAAGGCGTATGATATGTACGCAGAAACAGTCGGCAGACGAGGCCCTCGGCTGGCAGCCCTCAGTCCGGCCGCGGTGCTCTCGCCACGCAGGAGTTCAGAGGATTCTGCGGATGATACCTTTAACGTCAAAGACTTGAGGCATGATCTGAAAGAAGTTGAAGAGAAGTTCCGCAAAGCAATGATTCTGAACGCGCAGTTAGACAACGACAAAGCATCGCTCGGCTATCAGCTGGAACTGCTCAAGGACAGGATCGATGAGCTACAAGAGGAATACGCACAATTACAGCGCGAGCATCGGGAGAAGTGTTCCGTCCACGAGCGGCTAAAGCGCGAGCACGTGTGCGTGGAGCGCGAGCTGTCGGCGGCGCGGGACGCGGTGCTGGCGCGCGAGGCGGCGGCGGCGGCGGCGGGCTACGTGTTCGCGGAGGCGCCGCCCGGAGCCGCCGCCGCCGGCTTCGGCGCCGTGCCGCCGCTGGCGCTGCTCTCGCACCAAGCCGACCTCTTGCTCGGAGAGCCGGAGGCCACCCTGGACGTGCGGTTGCAGAACCTGGTCACCTCAAAGCAGTCTCTGGAATCAGAGGTGCGCAAACTGAAACTCACATTAAACGAAGAACGCGCCGCGAGACAGAACGGCGTCGCCAACCACCACGACGACCAGTACGAGACTGAATTGGAATCGCTTCGGAAGTGTTGCGTGGAGGCGAAGGGGCGGGCGGCGCGCGCCGAGGCGGAGGCGGCGCTGCAGGCGGCCAGCAGCGCGCGCCTCGAGGCACAGCTGCAGCGCCTGCGTGCGCGGCAGGACTCGCACGACGACCTCGAGGAGCATCTCAAGCACGAGCGCAGGAAGCTGCAGCGAGAGGCGCGAGAGGCTCAGAATCGCGTGGAAGAGTTGGAGACAGAAAACAGCCACCTCACCAAGAGACTCGACAAACTGAAGAACGCCAAATCTGCACTGCTCAAGGACCTGTGA
- Protein Sequence
- MSFRHLSNSSENTAEQRLAARRAARAEARDIRMRELERQQREQEDHADKAYDMYAETVGRRGPRLAALSPAAVLSPRRSSEDSADDTFNVKDLRHDLKEVEEKFRKAMILNAQLDNDKASLGYQLELLKDRIDELQEEYAQLQREHREKCSVHERLKREHVCVERELSAARDAVLAREAAAAAAGYVFAEAPPGAAAAGFGAVPPLALLSHQADLLLGEPEATLDVRLQNLVTSKQSLESEVRKLKLTLNEERAARQNGVANHHDDQYETELESLRKCCVEAKGRAARAEAEAALQAASSARLEAQLQRLRARQDSHDDLEEHLKHERRKLQREAREAQNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00432218;
- 90% Identity
- -
- 80% Identity
- -