Basic Information

Insect: Dasysyrphus tricinctus
Gene Symbol: -
Assembly: GCA_963921185.1
Location: OY992530.1:247878837-247880321[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.44 1.2e+02 5.5 0.2 2 23 86 107 85 107 0.93

2 13 0.00013 0.035 16.6 0.5 1 23 155 178 155 178 0.98

3 13 0.00062 0.17 14.4 4.1 2 23 187 208 187 208 0.97

4 13 2.2e-06 0.00061 22.1 1.5 1 23 214 236 214 236 0.99

5 13 3.3e-06 0.00091 21.6 0.3 1 23 242 264 242 264 0.98

6 13 0.00014 0.038 16.5 4.6 2 23 270 291 269 291 0.96

7 13 8.7e-06 0.0024 20.3 1.5 1 23 297 319 297 319 0.98

8 13 1.4e-06 0.00038 22.8 1.4 1 23 325 347 325 347 0.99

9 13 2.3e-05 0.0062 19.0 2.5 1 23 353 375 353 375 0.99

10 13 2.3e-05 0.0062 19.0 1.0 1 23 381 403 381 403 0.98

11 13 2.5e-07 6.7e-05 25.1 0.2 1 23 409 431 409 431 0.98

12 13 3.8e-06 0.0011 21.4 1.0 1 23 437 459 437 459 0.98

13 13 1.3e-05 0.0036 19.7 0.3 1 23 465 488 465 488 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.44	1.2e+02	5.5	0.2	2	23	86	107	85	107	0.93
2	13	0.00013	0.035	16.6	0.5	1	23	155	178	155	178	0.98
3	13	0.00062	0.17	14.4	4.1	2	23	187	208	187	208	0.97
4	13	2.2e-06	0.00061	22.1	1.5	1	23	214	236	214	236	0.99
5	13	3.3e-06	0.00091	21.6	0.3	1	23	242	264	242	264	0.98
6	13	0.00014	0.038	16.5	4.6	2	23	270	291	269	291	0.96
7	13	8.7e-06	0.0024	20.3	1.5	1	23	297	319	297	319	0.98
8	13	1.4e-06	0.00038	22.8	1.4	1	23	325	347	325	347	0.99
9	13	2.3e-05	0.0062	19.0	2.5	1	23	353	375	353	375	0.99
10	13	2.3e-05	0.0062	19.0	1.0	1	23	381	403	381	403	0.98
11	13	2.5e-07	6.7e-05	25.1	0.2	1	23	409	431	409	431	0.98
12	13	3.8e-06	0.0011	21.4	1.0	1	23	437	459	437	459	0.98
13	13	1.3e-05	0.0036	19.7	0.3	1	23	465	488	465	488	0.96

Sequence Information

Coding Sequence: ATGGCTGGCGAGTTAACACAAATCGAATTCTCTAATTTGGTCAAGGACGGCAACTGCACCTTCACCGACTGGCCAGACGACAACGATGTGGATGAAGATAGTCAAATCGAGGGCGTTCTCATGACCGAGGACATGATCAAGCAAGAGCCAGAGTTATTAGTTGACTTAAATAACCCAGATGAGGAGCATAAAATACGTTCGTTTCTCAAAAAAACCAACGTTGGTGACGAGGAGAGACAAAAACTCAATTGGCTTACGTGTTTGCTCTGCGATGAGCGTTTTCTAACTACCAAAGAATTATCTCTTCATGTGCTAGAGCACACGAAATCTGAATTGAAAGAAGATCTCCCAAAAGAACTTACCAATCGTCAAGCACCGAAGACTCAATACACTGGGTTCTCGAGGCAGGAGCTACTGCAGGACTATGTCAACATCGCCGTCGAGCTCGATGGAAAGGCTACATATACTTGCAAACTTTGTCCTAATAAAGTATTTGCGCGACAGGTGTCCATACGGAACCACATGAGAATCCACGAAAATCCCACTTATAAAGAACGCTCGTGTCATGTCTGCCACAAGACGTTCCTTCGTCGAGATACTCTGTTGGTCCACTTAAGGGTTCACAGCGACGAACGAAAGTACAAATGTGACATTTGCGAGGCCTCCTTCACACATTCCAGTTCCCTGGTCTCGCACAAACGTATCCACACTGGCGAAAAGCCCTATGTGTGTTCTATTTGCAGTAAAGCGTTTCGCGAGTCTGGCCAGCTAACGGCTCACAAGAAGATCCATTTTGAAAAGCTTTTGCaatgccccaaatgcgacaagaAGTTCACCTCCAACAAAACCCTTCGCGGTCACTGCCGTACGCACACGGATGAGCGTCCGTATGCGTGTAAGTTCTGTGCAAAGATGTTTCGTTCGAGTACGAGTCTGACGACACATTTGCGTGTGCATACAGGTGAGAAGCCGTACAAATGCGAGATATGCTCCTACGCGACCAAACAGTCTGGCTACTTGCGGACGCACATGAGAACCCATACCGGCGAGAGACCCTACAAATGCTCCTACTGCGACAAGGGATTCTCGGAAAGGAAGCGTCTAGTGACGCACACCCGAAGTCATACGGGTGAACGCCCGTACAAGTGCATATATTGCGATTCAGCATTCGCTCGAAATGATAACCTCAAGTACCACCTGCGAACGCATACCGGTGAGAAGCCATTCGAATGTGCTGATTGTGGAAAACGATTTACCCAGCGTACAGCACTCATCGTTCACCAAAAGATTCATACCGGTGATAAGCCCTATTCTTGCCCCCACTGCGACATGAATTTCCGCCAGAGCGGGACCTTGGTCACTCATTTGTTGATGCACACAAACGAGCGACCATTTAAGTGTGATCTCTGCGAAAGAGGATTTAGGCAGAGGGCTTTGTTGAAACGACATGTCGCCAGTGCGCATGGGGGTGTTATTAATaagtag
Protein Sequence: MAGELTQIEFSNLVKDGNCTFTDWPDDNDVDEDSQIEGVLMTEDMIKQEPELLVDLNNPDEEHKIRSFLKKTNVGDEERQKLNWLTCLLCDERFLTTKELSLHVLEHTKSELKEDLPKELTNRQAPKTQYTGFSRQELLQDYVNIAVELDGKATYTCKLCPNKVFARQVSIRNHMRIHENPTYKERSCHVCHKTFLRRDTLLVHLRVHSDERKYKCDICEASFTHSSSLVSHKRIHTGEKPYVCSICSKAFRESGQLTAHKKIHFEKLLQCPKCDKKFTSNKTLRGHCRTHTDERPYACKFCAKMFRSSTSLTTHLRVHTGEKPYKCEICSYATKQSGYLRTHMRTHTGERPYKCSYCDKGFSERKRLVTHTRSHTGERPYKCIYCDSAFARNDNLKYHLRTHTGEKPFECADCGKRFTQRTALIVHQKIHTGDKPYSCPHCDMNFRQSGTLVTHLLMHTNERPFKCDLCERGFRQRALLKRHVASAHGGVINK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00975266;
90% Identity: iTF_00664520;
80% Identity: iTF_00427755;