Basic Information

Gene Symbol
Znf131
Assembly
GCA_018231745.1
Location
DVQP01008539.1:3271-6447[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 3.8 3.1e+02 2.8 0.1 1 23 87 112 87 112 0.85
2 20 4.2 3.5e+02 2.7 2.4 6 23 192 210 192 210 0.96
3 20 0.27 22 6.4 0.0 1 23 219 242 219 242 0.94
4 20 1.1e-06 9.5e-05 23.3 1.3 2 23 267 288 267 288 0.97
5 20 0.00018 0.015 16.4 2.2 1 23 295 318 295 318 0.96
6 20 0.049 4.1 8.7 0.0 1 23 324 346 324 346 0.95
7 20 9.3e-05 0.0077 17.3 2.2 1 23 352 374 352 374 0.98
8 20 0.091 7.5 7.9 3.4 1 23 529 551 529 551 0.96
9 20 0.00046 0.038 15.1 2.0 2 23 558 580 557 580 0.92
10 20 6.6e-08 5.4e-06 27.2 3.2 1 23 586 608 586 608 0.99
11 20 1.4e-06 0.00012 23.0 4.4 1 23 614 636 614 636 0.98
12 20 0.00027 0.022 15.9 2.2 1 23 642 664 642 664 0.96
13 20 0.00019 0.016 16.4 4.8 1 23 670 692 670 692 0.97
14 20 0.007 0.58 11.4 5.6 1 23 698 721 698 721 0.91
15 20 0.46 38 5.7 0.2 2 18 787 802 786 807 0.70
16 20 0.00015 0.013 16.6 0.0 1 23 815 838 815 838 0.96
17 20 9.5e-06 0.00079 20.4 2.7 1 23 844 866 844 866 0.96
18 20 7.8e-05 0.0065 17.6 0.4 1 23 872 894 872 894 0.98
19 20 0.0012 0.096 13.9 0.2 1 23 900 922 900 922 0.97
20 20 0.011 0.95 10.7 0.6 6 23 932 949 930 949 0.97

Sequence Information

Coding Sequence
ATGTGCTGCCCCAGGTTGTGTGCTACCAGTGCTCCAGTACTGTGCTCGCCTGGCATGAGCTGGTGCAATGCTGTCAACAGGCTGACCAGGCTCTCCGACAGCAGGCAGCCAACAGGGTATGGCGAGAGGAAAGCAACTGAAATATCAGGACCAACATCAGATCCAAAGGGCTTGAACTTATTTACATCCACAGTGAGACAAGTGTTGAATGATTACTGTCAAATGCTTAATATAAATCAGGAAAGTTCTGACATATGTTATGTCTGTCAAGAATGTGACGGACATCCTGTCTCAAGCtctatagaaaatttatcacAGCATCTGCAATTGGTACACAGGGAATTGATAAATGAGAaactaattgaaaattttataaaagacaatattttcattgaggAAGTCCTCCTGTCTGATGAATTATTTGGAAGCGATGATCTCACCGAGCCCGTTTCTAACAAAGAGATACCAAATTATTGCTGTCCCTTTTGTGAGAGCATGTTTTCTTCACCCACTAGACTTATATTCCACCTGAACTGTCACCTCGAGGTCTGTATCGCCGACGGAGTGTACTGCTGCCACCAACTcttcaataacaaaacatcTTTCGTCACTCACCTCCAATCTCAACACGTTCGTAAAGTTATCGAATCGTCTTACGTGTGCAAGAGCTGTGGCCTCCCAGCCGGCGGCCTCGCCGAGCTCAGGaaacatattaatgataatcaTCCCGAAGCGGAAGATAGATATGAGAAGAGCAGGACAGAAGGCAGTCCCAAATGCCAGAAATTTATTCCGGCCGTGTGTTCCGAGTGCAACAAAACTTTCTCTAACAAGTACAACATGTTAGTGCACATGAGGAACCATTTCGGACAAACCAGTCGGTTCGCGTGCGACAAGTGCAATAAGACTTACAAGAGCCAAGGCAGCCTCCTATACCACCACAAGGTAGTCCACGAAGGACAACTCAAGTTCGTGTGCTCGTCGTGCGGAGAGGCCTTCCCGTCGCGGGCTGCGAGAGACGTACACGCGCGCCTCCACACTGGTCAGAGGCCTTTTTCGTGCCAATACTGCGGGAAGGCCTATCGAGCTAAAAACACTCTACACCGCCATATAGACATGCATCTGAACATTAGAAAATATGCCTGCAGCTTTTGTGATAAAAAATGGATCCCCTCTCCCGACCCGTGCTACTTGGAGAGGAGAGGATTTAAAATTGAACTCAGCGACCCAACACACTGTAAAGATACCGAACCAGTCAGAGGTCATCACAGCCACGGATTGGATTCCGACGAAGACGACAAACCTCTCGCTGAGTTCGCGGCCGAAAAACCATCAGatatatacagaaaattttataggGCATTAACAAAGTTTCGAGATCACTACGTTCAACATGAATTTGAGCGAGATCGCTGTTCAGACCTGTCGCCCTCGAGTGATTCAGAGGAAGAAAGAAATCGTGAGGAACTGGATCCCATTCAGTACGATGACCTCTCCCACAGCAACATGAGGAAAGACAAAATGAACGAGGAGACGCGGCTCGAGCTCAGCCAAGTGCAGGCGAAGATAAACGGGAAGACTTACTTCATCTGCAAGATCTGCGACAAGAAGCTGAGCTCGTCACACACTTATATTTTCCATAAGAGAATACACACGGGAGAGCGACCGTGCGTCTGTCACGTGTGCGGCAAACAATTCCGCGCGCCGAACGGCCTCCAGCGACATCTCACCGAAACGCACGAACGACTGCGCCGGTACACATGCCAGATTTGCCACAAGTCCTTCGCGAACTCGCAGAACCTCAAACAACACATGAGAATACACACGGGCGAAAGACCTTTCGTGTGCTCCCACTGCGGCAAGCGATTCACGCAGAGTGGCTCGCTACATGTGCACCTCAAGACCCACAGCGCATCGCTCCCGCACGCCTGCCGGGACTGCGGCGCGAAGTTCCGTATGCGCTCCGGACTGACGCGGCACCGCCTCAAACATACCGGCGAGAGGCCGCACGTCTGTCGACACTGCGGAAAAGGGTTCAGACAAAAACATGAGATGAATGCGCACGCCCTCACGCACTCGGACATCAAACCGCACGTGTGCAGCGTCTGCGGAACTGCCTTCCGCCAACGACGGGCGCTCCGCCATCACTGCAAACGACTTCATGACAGCAAGCCCGCGGAAGACGCGCACGAATTACTTTACAGAGAAGCGACGTGGGCACCAAAACGACGGGGCGAAAGAGAACACACAACCGCCGCTACGGACGACGGGGTGAGGCTCTGCGACGAGGTAACCGATCGACCGGAAGACTGCGAGGAGCTGCCGACAAACATAGAGAAAGACAACGGCGGGAGTAGCGAGTGCAGCGTCTGCGGCAAGTCAGTGGCTCGCGCGAGTAGGGCGCGGCATAGACGTGCGCACGAAGCAGCGAGCTGCCAACGCTACCGCTGCAGCGTGTGCGGAGGCGCCTTCTCGGATGGCGGTAACCTCGCTCGCCACGTGCGCGCCCTGCACGCCGCGCGTCGGCCACACGCGTGCCCGCTCTGCCGCCGAACCTTCACGCGCGCCGCTCACCTCACCGACCACTTGCGGTCACATGAAGATCGCAGGGATTACGTGTGCCACGTGTGCGGGAAAGCGTCCAAGACCGGCGCCGGACTACGCTCACACCGCCGCGTGCACGTCGAAGAGTTCAAATTCGAGTGCCCGACTTGTTCGGCGCGTTTTAAAACAGGCCGCCAGTTGCGCGCACACGCCTCTGTACACACGGGTGAAAGGCCACACGCCTGCAGCTGTGGAGCCGCCTTCCGCCTGCGCGCTCAGCTCACCAGGCACGAGCGCACTCACACACGGACCAAAACAACCGCCGACTGA
Protein Sequence
MCCPRLCATSAPVLCSPGMSWCNAVNRLTRLSDSRQPTGYGERKATEISGPTSDPKGLNLFTSTVRQVLNDYCQMLNINQESSDICYVCQECDGHPVSSSIENLSQHLQLVHRELINEKLIENFIKDNIFIEEVLLSDELFGSDDLTEPVSNKEIPNYCCPFCESMFSSPTRLIFHLNCHLEVCIADGVYCCHQLFNNKTSFVTHLQSQHVRKVIESSYVCKSCGLPAGGLAELRKHINDNHPEAEDRYEKSRTEGSPKCQKFIPAVCSECNKTFSNKYNMLVHMRNHFGQTSRFACDKCNKTYKSQGSLLYHHKVVHEGQLKFVCSSCGEAFPSRAARDVHARLHTGQRPFSCQYCGKAYRAKNTLHRHIDMHLNIRKYACSFCDKKWIPSPDPCYLERRGFKIELSDPTHCKDTEPVRGHHSHGLDSDEDDKPLAEFAAEKPSDIYRKFYRALTKFRDHYVQHEFERDRCSDLSPSSDSEEERNREELDPIQYDDLSHSNMRKDKMNEETRLELSQVQAKINGKTYFICKICDKKLSSSHTYIFHKRIHTGERPCVCHVCGKQFRAPNGLQRHLTETHERLRRYTCQICHKSFANSQNLKQHMRIHTGERPFVCSHCGKRFTQSGSLHVHLKTHSASLPHACRDCGAKFRMRSGLTRHRLKHTGERPHVCRHCGKGFRQKHEMNAHALTHSDIKPHVCSVCGTAFRQRRALRHHCKRLHDSKPAEDAHELLYREATWAPKRRGEREHTTAATDDGVRLCDEVTDRPEDCEELPTNIEKDNGGSSECSVCGKSVARASRARHRRAHEAASCQRYRCSVCGGAFSDGGNLARHVRALHAARRPHACPLCRRTFTRAAHLTDHLRSHEDRRDYVCHVCGKASKTGAGLRSHRRVHVEEFKFECPTCSARFKTGRQLRAHASVHTGERPHACSCGAAFRLRAQLTRHERTHTRTKTTAD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
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80% Identity
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