Dchr010154.1
Basic Information
- Insect
- Danaus chrysippus
- Gene Symbol
- Znf131
- Assembly
- GCA_004959915.1
- Location
- RPCZ01000070.1:1094310-1098253[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 3.3 2.4e+02 2.7 0.1 1 23 155 180 155 180 0.85 2 21 0.14 10 7.0 0.7 1 23 226 248 226 248 0.96 3 21 1.4 1e+02 3.9 0.9 6 23 260 278 260 278 0.96 4 21 0.043 3.1 8.6 0.1 2 23 288 310 288 310 0.93 5 21 1e-06 7.2e-05 23.2 1.3 2 23 335 356 335 356 0.97 6 21 8.1e-05 0.0059 17.2 2.0 1 23 363 386 363 386 0.96 7 21 0.043 3.1 8.6 0.0 1 23 392 414 392 414 0.95 8 21 5.2e-05 0.0038 17.8 0.9 1 23 420 442 420 442 0.98 9 21 0.056 4 8.3 3.3 1 23 597 619 597 619 0.96 10 21 0.00064 0.046 14.4 2.0 2 23 626 648 625 648 0.91 11 21 5.7e-08 4.2e-06 27.1 3.2 1 23 654 676 654 676 0.99 12 21 1.3e-06 9.1e-05 22.9 4.4 1 23 682 704 682 704 0.98 13 21 0.00023 0.017 15.8 2.2 1 23 710 732 710 732 0.96 14 21 0.00017 0.013 16.2 5.0 1 23 738 760 738 760 0.97 15 21 0.0056 0.41 11.4 5.8 1 23 766 789 766 789 0.91 16 21 0.011 0.77 10.5 0.1 2 23 861 881 860 881 0.92 17 21 1.5e-06 0.00011 22.7 0.3 1 23 889 912 889 912 0.96 18 21 2.8e-05 0.002 18.7 3.4 1 23 918 940 918 940 0.98 19 21 4.7e-06 0.00034 21.1 0.7 1 23 946 968 946 968 0.98 20 21 0.0083 0.6 10.9 0.1 1 23 974 996 974 996 0.97 21 21 0.0064 0.46 11.2 0.6 5 23 1005 1023 1004 1023 0.96
Sequence Information
- Coding Sequence
- ATGAACGGTGGAACCGAATCAGACCAACTGGACAAACTTGATATTAAATGCAGCGGCGAAACTCATGAGAACGTGGAGGATTCTCCAAATATCTGTCGAATATGTGCCACCGTCACGGACCTGGTCATTCCTATATTTGAAGGAGAAGGACTACAAAATAACTTGGCCgaaaaaattcataaacatttacctataaagGTGTCTGTGCAGGATGTGCTGCCCCAGGTTGTGTGCTACCAGTGCTCCAGTACTGTGCTGGCTTGGCATGAGCTGGTGCAGTGCTGTCAACAAGCTGACCAGGCTCTCCGACAACAGGCAGCCAATAGGAAAAAGAAAGCAGTTGAAGTAACGGGAACACCATCAGATCCAAAGGGTTTGAACTTGTTTACATCCACAGTGAGAGATGTTTTGAATGATTACTGTCAAATGCTTAACATAAATCAGGAAAACTCTGACATATATTACGTCTGTCAAGAATGTGACGGGCATCCTGTCTCAAGctctatagaaaatttatcacAGCATCTTCAACTGGTACACAATGAATTGAGTAATGAAAAACTAAttgaacaatttataaaagacaatattttcatagagGAAGTCCTCATCTCTGATGAATTATTAAGTAGTGAGGATCTCAGTAAGCAGGCTCCTAACAAAGAGTTACCAAATTATTCCTGTCCTTTTTGTGAAAGCATGTTTTCTTCACCCACTAGACTTGTATTCCACCTGAACCGTCACCTCGAGGTCTGTATCGACGACGGAGTGTACTGCTGTAACCAgctgttcaataataaaacatctttCGTCACTCACCTACAATCTCAACACGTTCATAAGGTTATCGACTCGTCTCGCGTGTGCAAGAGCTGCGGCCTCACAGCTGGCGACCTCGACGAGCTCCAGAAACATATAAACGATAAACATCCTCAAGCGGAGGAAAGATATGAGAGGGGCAAGACAGAAGGCAGTCCCAAATGTCAGAAATTTATTCCGGCCGTGTGTTCCGAGTGCAACAAAACCTTCTCCAACAAGTACAACATGTTAGTGCACATGAGGAACCATTTCGGACAGCCGAGTCGGTTCGCGTGCGACAAGTGCAATAAGACGTACAAGAGCCAAGGCAGCCTCATATACCACCACAAGGTGGTCCACGAAGGACAGCTCAAGTTCGTGTGCTCGTCGTGCGGAGAGGCCTTCCCGTCACGAGCAGCCAGGGACGTGCACGCGCGCCTCCACACTGGTCAGAAACCTTTTTCATGCCAATACTGTGGGAAGGCCTACCGAGCTAAGAACACTCTATACAGACACATAGACATGCATCTGAACATTAGAAAATATGCCTGCAGCTTTTGTGATAAAAAATGGATCCCATCTCCCGACCCATACTTCTTGAAGAGGagagaatttaaaattgaactcAATGAACCAACACACAGTAACGGTACTGAGAGAGTCAGAGGTCATCACAGGCATGGATCGGAATCCGACGAAGATGACAAACCTCTCGCTGAGTTCGCGGCCGCTAGACCATCAGATATATACAGAAACTTTTATAGGGCATTAACAAAGTTCCGAGATCACTACGTTCAACATGAGTTTAAGAGAGATCGCTGCTCAGATCTATCCAACTCGAGCGATTCGGAGGAAGAAAGGAATTGGGAAGAACTGGATCCGGTTCAGTACGACGACCTCTCCAACAGCAACATGAGGAAGGACAAAATGAACGAGGAGACCCGACTCGAGCTCAGCCAGGTGCAGACGAAAATAAACGGGAAGACTTACTACATCTGCAAAATATGTGACAAGAAGCTGAGTTCGTCACACACTTATATTTTCCACAAGAGAATACACACGGGGGAGCGACCGTGCATCTGTCACGTGTGCGGCAAACAGTTCCGCGCGCCCAACGGACTCCAGAGACATCTCACAGAGACACACGAACGACTGCGCCGGTACACTTGCCAGATCTGCCACAAGTCGTTCGCGAACTCGCAGAACCTCAAACAACACATGAGAATACACACGGGCGAGAGACCTTTCGTGTGCTCCCACTGTGGGAAGCGATTCACACAGAGTGGCTCGCTACATGTGCACCTAAAGACACACAGCGCCACACTCCCGCACGCCTGCCGGGACTGCGGCGCCAAGTTCCGTATGCGCTCCGGACTGACGCGGCACCGCCTCAAACACACCGGAGAGAGGCCGCACGTGTGTCGGCATTGCGGGAAAGgattcaaacaaaaacatgAAATGAATGCGCACGCTCTCACACACTCGGACAGCAAACCGCACGTGTGTACCGTCTGCGGAACTGCCTTCCGCCAACGACGAGCCCTCCGCCATCACTGTAAACGATTACACGACAGCAAGCCCGGGGAAGACGCGCACGTTTACAACAACGCGATTAATTACATTCTGACAGGAGCGACGTGGACACCAAAACGACGGGTCGGAATAGAACACACTCCTCCTACCACGGAAGACTGGGGGAGACTCTGCGACGTCGTAATCTATCGACCGGAAGACTGCAAGGAGCTgccgaaaaatataaaaaaagagaaCAAGGACAGTAGTGAGTGCAGTATTTGTGGCAAGTCAGTGACTCGCGCGAGTAGGGCGCGACATATACGAGCGCACGAAGCAGCGGGCACCCAGCGCTACCGCTGCAGCGTGTGCGGGTGTGCCTTCTCAGACAGCGGAAACCTCGCGCGCCACGTCCGCGCCCTGCACGCCGCGCGTCGGCCTCACACGTGCTCACTCTGCCGCCGGAGCTTCACGCGCGCCGCTCACCTCGCCGATCACTTGCGTTCACATGACGATCGCAGGGATTACGTGTGTCACGTGTGCGGGAAAGCGTCCAAGACCAGCGCCGGGCTGCGCTCACACCGCCGCGTGCACGCCGAAGAGTTCGGATTCGAGTGCCCGGCCTGTTCGGCGCGATTCAAAACAGGCCGCCAGCTGCGCGCCCACGCCTCTGTACACACGGGTGAGAGGCCATACGCCTGCACTTGTGGAGCCGCCTTCCGCCTGCGCGCTCAGCTCACCAGGCACGAGCGTACTCACACACGGACACAACAACCGCCGACTGACTCGTGA
- Protein Sequence
- MNGGTESDQLDKLDIKCSGETHENVEDSPNICRICATVTDLVIPIFEGEGLQNNLAEKIHKHLPIKVSVQDVLPQVVCYQCSSTVLAWHELVQCCQQADQALRQQAANRKKKAVEVTGTPSDPKGLNLFTSTVRDVLNDYCQMLNINQENSDIYYVCQECDGHPVSSSIENLSQHLQLVHNELSNEKLIEQFIKDNIFIEEVLISDELLSSEDLSKQAPNKELPNYSCPFCESMFSSPTRLVFHLNRHLEVCIDDGVYCCNQLFNNKTSFVTHLQSQHVHKVIDSSRVCKSCGLTAGDLDELQKHINDKHPQAEERYERGKTEGSPKCQKFIPAVCSECNKTFSNKYNMLVHMRNHFGQPSRFACDKCNKTYKSQGSLIYHHKVVHEGQLKFVCSSCGEAFPSRAARDVHARLHTGQKPFSCQYCGKAYRAKNTLYRHIDMHLNIRKYACSFCDKKWIPSPDPYFLKRREFKIELNEPTHSNGTERVRGHHRHGSESDEDDKPLAEFAAARPSDIYRNFYRALTKFRDHYVQHEFKRDRCSDLSNSSDSEEERNWEELDPVQYDDLSNSNMRKDKMNEETRLELSQVQTKINGKTYYICKICDKKLSSSHTYIFHKRIHTGERPCICHVCGKQFRAPNGLQRHLTETHERLRRYTCQICHKSFANSQNLKQHMRIHTGERPFVCSHCGKRFTQSGSLHVHLKTHSATLPHACRDCGAKFRMRSGLTRHRLKHTGERPHVCRHCGKGFKQKHEMNAHALTHSDSKPHVCTVCGTAFRQRRALRHHCKRLHDSKPGEDAHVYNNAINYILTGATWTPKRRVGIEHTPPTTEDWGRLCDVVIYRPEDCKELPKNIKKENKDSSECSICGKSVTRASRARHIRAHEAAGTQRYRCSVCGCAFSDSGNLARHVRALHAARRPHTCSLCRRSFTRAAHLADHLRSHDDRRDYVCHVCGKASKTSAGLRSHRRVHAEEFGFECPACSARFKTGRQLRAHASVHTGERPYACTCGAAFRLRAQLTRHERTHTRTQQPPTDS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00419906;
- 90% Identity
- -
- 80% Identity
- -