Dple013133.1
Basic Information
- Insect
- Danaus plexippus
- Gene Symbol
- Znf131
- Assembly
- GCA_018135715.1
- Location
- JAEQBL010000002.1:5191668-5195611[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 5.9 4.1e+02 2.1 0.1 1 23 155 180 155 180 0.81 2 20 2.9 2e+02 3.0 2.0 1 19 226 244 226 248 0.85 3 20 2.4 1.7e+02 3.3 0.3 6 23 260 278 260 278 0.96 4 20 0.011 0.79 10.6 0.0 1 23 287 310 287 310 0.95 5 20 1.1e-06 7.4e-05 23.3 1.3 2 23 335 356 335 356 0.97 6 20 0.00014 0.0099 16.6 1.7 1 23 363 386 363 386 0.96 7 20 0.046 3.2 8.7 0.0 1 23 392 414 392 414 0.95 8 20 5.5e-05 0.0038 17.9 0.9 1 23 420 442 420 442 0.98 9 20 0.084 5.8 7.9 3.4 1 23 597 619 597 619 0.96 10 20 0.00068 0.047 14.5 2.0 2 23 626 648 625 648 0.91 11 20 6.1e-08 4.2e-06 27.2 3.2 1 23 654 676 654 676 0.99 12 20 1.3e-06 9.3e-05 23.0 4.4 1 23 682 704 682 704 0.98 13 20 0.00025 0.017 15.8 2.2 1 23 710 732 710 732 0.96 14 20 0.00017 0.012 16.3 4.8 1 23 738 760 738 760 0.97 15 20 0.15 10 7.1 0.2 2 21 819 837 818 839 0.70 16 20 2.5e-05 0.0018 18.9 0.2 1 23 847 870 847 870 0.96 17 20 1.2e-05 0.00084 20.0 1.8 1 23 876 898 876 898 0.96 18 20 7.3e-05 0.0051 17.5 0.4 1 23 904 926 904 926 0.98 19 20 0.0088 0.61 10.9 0.1 1 23 932 954 932 954 0.97 20 20 0.0068 0.47 11.3 0.6 5 23 963 981 962 981 0.96
Sequence Information
- Coding Sequence
- ATGAACGGTGGAACCGCTTCAGACCAGCTAGACGAACTTGATATTAAATGCAGCGGCGAAACTCATGAGAACCTGCAGGATTCTCCAAATATATGTCGAATATGTGCCACCGTCACGGACCTGGTCATTCCTATATTTGAAGGAGAAGGACTACAAAATAACTTAGCAGAAAAAATTCATAAACATTTACCTATAAAGGTGTCTGTGCAGGATGTGCTGCCCCAGGTGGTGTGCTACCAGTGCTCCAGTACTTTGCTCGCCTGGCATGAGCTGGTGCAATGCTGTCAACAAGCGGACCAAGCTCTCCGACAGCAGGCAGCCCATAGGGAGAGGAAAGCAAACGAAGTAACAGGAACATCATCAGATCCAAAGGCTTTGAGCTTGTTAACGTCCTCAGTGCGAGGTGTGTTGAGTGATTACTGTCAAATGCTTAATATAAATCCGGAAACTTCTGACATCTGTTACGTCTGTCAAGAATGTGACGGACATCCCGTCTCAAGCTCTATAGAAAATTTATCAGAGCATCTGCAATTGGTACACAGTGAATTGAGTAATGAGAAACTAATTGAAAAATTTATAAAAGACAATATTTTCATAGAGGAAGTCCTCATCTCTGATGAATTATTTGGTAGCGATGATCTCAGCGAGCCTGCTCCTCAGAAAGAGTTGCCAAACTATTCCTGTCCTTTCTGTGAGAGCATGTTTTCTTCACCCACTAGACTCATTTTCCACCTGAACTGTCATCTCGAGGTCTGTATCGACGACGGAGTGTACTGTTGTGACCAACTGTTCGATAATAAAACATCTTACGTCAGTCACCTACAATCTCGACACGTTCGTAAAGTTATCGAATCGTCTTACGTGTGCAAGAGCTGTGGCCTCACAGCCGGCGACCTGGCCGAGCTCCAGAAACATATTAACGATAATCATCCCGAAGCGGAGGACAGATATGAGAAGGGCAAGACAGAAGGGAGTCCCAAATGTCAGAAATTTATTCCCGCCGTGTGTTCCGAGTGCAACAAAACTTTCTCTAACAAGTACAACATGCTGGTGCACATGAGGAACCATTTCGGACAAGCGAGTCGGTTCGCGTGCGGCAAGTGCAACAAGACTTACAAGAGCCAAGGCAGCCTCATATACCACCACAAGGTCGTCCACGAGGGACAGCTCAAGTTCGTGTGCTCGTCGTGCGGAGAGGCCTTCCCGTCACGAGCAGCGAGAGACGTACACGCGCGCCTCCACACTGGTCAGAGACCTTTTTCATGCCAATACTGTGGGAAGGCCTATCGAGCTAAGAACACTCTATACCGACATATAGACATGCATCTGAACATAAGAAAATATGCCTGCAACTTTTGTGATCGAAAATGGATCCCATCTCCCGACCCATACTTCTTGAAGAGGAGAGAATTTAAAATTGAACTCAATGAACCGACACACAGTAATGATACTGAGCCAGTCACAGCTCATCGCAGTCGTGGATCGGATTCCGACGAAGACGACAAACCTCTCGCTGAGTTCGCGGCCGGGAAGCCGTCAGACATATACAGAAACTTTTATAGAGCGTTAACAAAGTTTCGAGATCACTACGTTCAACATGAAATTAAGACAGATCGCTGCTCAGACCTAGCCAACTCGAGCGATTCGGAGGAGGAAAGAAACTGTGAAGACCTGGATCCGACTCAGTACGACGACCTCTCTAACAGCAACATGAGGAAAGACAAAATGAACGAGGAAACGCGACTCGAGCTCAGCCAGGTGCAGACGAAAATAAACGGGAAGACTTACTTCATCTGCAAAATCTGTGACAAGAAGCTGAGCTCGTCACACACTTATATTTTCCACAAGAGAATACACACGGGGGAGCGACCGTGCATCTGTCACGTGTGCGGTAAACAGTTCCGCGCGCCCAACGGACTCCAGCGACATCTCACCGAGACGCACGAACGACTGCGCCGGTACACATGCCAGATTTGCCACAAATCCTTCGCGAACTCGCAAAACCTCAAACAACACATGAGAATACACACGGGTGAGAGACCTTTCGTGTGCTCCCACTGCGGTAAGCGATTCACACAGAGTGGCTCGCTACATGTGCACCTCAAGACCCACAGTGCCACGCTCCCGCACGCTTGCCGGGACTGCGGCGCGAAGTTTCGTATGCGCTCCGGACTGACGCGGCACCGCCTCAAACACACCGGAGAGAGGCCGCACGTCTGCCGGCATTGCGGAAAAGGATTCAGACAGAAACATGAAATGAATGCGCACGCGCTCACGCACTCGGACAGCAAGCCGCACGTAGGAGCGACGTGGGCACCTAAACGACGGGTCGGAATAGAACACACGCCCGCCTCCACGGAAGAAGGGGTGAGGCTCTGCGACGTGGTAATCGATCCACCGGAAGACAGCAGGGAGCTGCCGAAAAATATAGAAAACGAGAACAGCGAGACTAGCGAGTGCAGCATTTGCGGCAAGTCAGTGCCTCGCGCGAGTAAAGCGCGGCATAGACGTGCGCACGAAGCAGCGGGCACCCAACGCTACCGCTGCAGCGTGTGCGGGTGTGCCTTCTCAGACGGCGGCAACCTCGCTCGCCACGTTCGTGCCCTGCACGCCGCGCGTCGACCTCACGCGTGCCCACTCTGCCGCCGGACTTTCACACGCGCCGCTCACCTTGCCGACCACTTGCGTTCACACGACGATCGCAGGGATTACGTGTGCCACGTGTGCGGGAAAGCGTCTAAAACCGGCGCCGGACTGCGCTCACACCGCCGCGTGCACGCTGAAGAGTTCGAATTCGAGTGCCCGGCGTGTTCGGCGCGTTTTAAAACAGGCCGTCAGTTGCGCGCGCACGCCTCCGTACACACGGGTGAAAGGCCATACGCCTGCACCTGTGGAGCCGCCTTCCGCCTGCGCGCTCAGCTCACCAGACACGAGCGGACTCACACACGGACGAAAACAACCGCCGACTGA
- Protein Sequence
- MNGGTASDQLDELDIKCSGETHENLQDSPNICRICATVTDLVIPIFEGEGLQNNLAEKIHKHLPIKVSVQDVLPQVVCYQCSSTLLAWHELVQCCQQADQALRQQAAHRERKANEVTGTSSDPKALSLLTSSVRGVLSDYCQMLNINPETSDICYVCQECDGHPVSSSIENLSEHLQLVHSELSNEKLIEKFIKDNIFIEEVLISDELFGSDDLSEPAPQKELPNYSCPFCESMFSSPTRLIFHLNCHLEVCIDDGVYCCDQLFDNKTSYVSHLQSRHVRKVIESSYVCKSCGLTAGDLAELQKHINDNHPEAEDRYEKGKTEGSPKCQKFIPAVCSECNKTFSNKYNMLVHMRNHFGQASRFACGKCNKTYKSQGSLIYHHKVVHEGQLKFVCSSCGEAFPSRAARDVHARLHTGQRPFSCQYCGKAYRAKNTLYRHIDMHLNIRKYACNFCDRKWIPSPDPYFLKRREFKIELNEPTHSNDTEPVTAHRSRGSDSDEDDKPLAEFAAGKPSDIYRNFYRALTKFRDHYVQHEIKTDRCSDLANSSDSEEERNCEDLDPTQYDDLSNSNMRKDKMNEETRLELSQVQTKINGKTYFICKICDKKLSSSHTYIFHKRIHTGERPCICHVCGKQFRAPNGLQRHLTETHERLRRYTCQICHKSFANSQNLKQHMRIHTGERPFVCSHCGKRFTQSGSLHVHLKTHSATLPHACRDCGAKFRMRSGLTRHRLKHTGERPHVCRHCGKGFRQKHEMNAHALTHSDSKPHVGATWAPKRRVGIEHTPASTEEGVRLCDVVIDPPEDSRELPKNIENENSETSECSICGKSVPRASKARHRRAHEAAGTQRYRCSVCGCAFSDGGNLARHVRALHAARRPHACPLCRRTFTRAAHLADHLRSHDDRRDYVCHVCGKASKTGAGLRSHRRVHAEEFEFECPACSARFKTGRQLRAHASVHTGERPYACTCGAAFRLRAQLTRHERTHTRTKTTAD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00419906;
- 90% Identity
- -
- 80% Identity
- -