Ccot011073.1
Basic Information
- Insect
- Cyphomyrmex costatus
- Gene Symbol
- Sub1_1
- Assembly
- GCA_001594065.1
- Location
- NW:804081-805548[-]
Transcription Factor Domain
- TF Family
- PC4
- Domain
- PC4 domain
- PFAM
- PF02229
- TF Group
- Unclassified Structure
- Description
- This domain is found at the C-terminal end of Activated RNA polymerase II transcriptional coactivator p15 from humans, YdbC from Lactococcus lactis, and other PC4 family members. p15 has a bipartite structure composed of an N-terminal regulatory domain and a carboxy-terminal cryptic DNA-binding domain [1-4]. Activity is controlled by protein kinases that target the regulatory domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.2 2.4e+03 -2.5 1.1 29 37 37 45 31 45 0.79 2 2 7.7e-28 9e-24 82.1 0.6 1 51 54 105 54 106 0.97
Sequence Information
- Coding Sequence
- ATGCCAAAGTCAAAAGAATATCTCTCTGACAGTGATGATAGCAGTGAAgaggaagtaaaatcaaagaaaaagcaaaaaagggaaagagaaGATGATAACAAAATGACAAAAGATGAGAAAAAACCGGCAAAGAAGGCAAAAACTGAAGACGAAACTGTTTGGGATTTGGGCAACAATCGTCAAGTAAACGTGAGAAACTTTAAAGGCAAATATTATGTCGACATCCGAGAGATGTATTATGACAAGGACGGTGATTTAAAACCTGGGAAGAAAGgaatATTCTTGACTATGCAACAGTGGCAAAAGTTCATGGATGTTGTGGAAGAGGTGGATAAAGTGGCCAAATCAAAAAgttag
- Protein Sequence
- MPKSKEYLSDSDDSSEEEVKSKKKQKREREDDNKMTKDEKKPAKKAKTEDETVWDLGNNRQVNVRNFKGKYYVDIREMYYDKDGDLKPGKKGIFLTMQQWQKFMDVVEEVDKVAKSKS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01229030;
- 90% Identity
- iTF_01476180;
- 80% Identity
- -