Cpri007530.1
Basic Information
- Insect
- Cryptocephalus primarius
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_963576515.1
- Location
- OY754941.1:9198062-9203354[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-111 2.5e-107 358.8 27.5 1 300 38 324 38 324 0.94 2 2 0.047 9.7e+02 -1.0 3.2 6 230 355 390 325 399 0.45
Sequence Information
- Coding Sequence
- ATGGAAGTAGTCGACGTCGAGGGCGTCACGAGGGGAGAAACCTCGGATTTCTTCGAGGGAAATCACGACGCCGAGGTGATTCACTCGTTCATCAGCAGTACCACGGACGAAGCGGAGGCGAGATTATGGGCGAAACGTCAGGCGAGAGCCGAAGCTAGAGAGATACGTATGCGGGAGCTCGAGAGGCAACAAAAGGAACAAGAGGAGAACGCCGACAGGCAATTCGACATGCTAACAGAACCTATCTGTAGGACCCCCAGGAACAACGTCAGCACCAGGTACCTGTCGAGCAGGAGGAGCTCGGAGGACTCGTTGGAGGATGGGGGTGGTAGTCTCAGAGAATTGAGGCATGAGCTCAAGGAGGTCGAAGAGAAGTTCCGGAAGGCGATGATAGCAAACGCCCAACTGGACAACGATAAGACGGCGCAGACCTACCAGTTGGAACTGCTGAAGGATAGATTAGAGGAGTTGGAGGAGGAGCACTCGCAGCTGAAACGGGAGCACAGGGAAAAGTGTAGAGAGCACGACCAGCTCAAAAGGCTCTGCGCGAGCCTGAAGGATAAATTGGCCGTGACCGAGGCGGAGCTGAGCGAGAGGGACAGGTTGATAGAGGAGAAGGGCCTCGTCATCGTCAGCGAGGAGCCGGCGCCAAACGAGGGCGGCACGTCGGAGCCCCCCAAGAAGGTCCTCGTGAGCGCCGAGAACGCGCAGTTGTTGGAGAGCGTAGGCGATGGGAGTTTAGATGTTCGACTTGCTCGGTTTGCCAAGGAAAAAAGCGATCTACTGGATCAAATTAGTCATTTACAGTTAGAACTAGAGGAGGAAAAGAACAAGAGGCGGAAGTACAGCATTTCCGGGCTGTTGAATGGCCCATCTTCGGATTACGATTACGATGACATACAAAGGGAGGCGAGCAAACAGCTGGCAGATTACAAATTCCGAGCTCAGAAAGCCGAGCAGGACGTCGCCACTTTACAGGCGACAGTGGCGAGGCTCGAGAGCCAAGTAATCCGATACAAAACGGCCGCCGAGGTATCGGAACAGAGCGAGGAGGCCCTGAAAGCCGAGAAGCGTAAATTGCAGCGAGAGGCGAGAGATGCTTTAACAAGAGCAGAAGAACTAGAAACATCCAACACACACCTGCTAAAAAGGTTAGACAAGTTAAAAAATGCGAAATCCGCCCTCCTGAAAGAACTTTGA
- Protein Sequence
- MEVVDVEGVTRGETSDFFEGNHDAEVIHSFISSTTDEAEARLWAKRQARAEAREIRMRELERQQKEQEENADRQFDMLTEPICRTPRNNVSTRYLSSRRSSEDSLEDGGGSLRELRHELKEVEEKFRKAMIANAQLDNDKTAQTYQLELLKDRLEELEEEHSQLKREHREKCREHDQLKRLCASLKDKLAVTEAELSERDRLIEEKGLVIVSEEPAPNEGGTSEPPKKVLVSAENAQLLESVGDGSLDVRLARFAKEKSDLLDQISHLQLELEEEKNKRRKYSISGLLNGPSSDYDYDDIQREASKQLADYKFRAQKAEQDVATLQATVARLESQVIRYKTAAEVSEQSEEALKAEKRKLQREARDALTRAEELETSNTHLLKRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01226914;
- 90% Identity
- iTF_00391928;
- 80% Identity
- -