Cmor015042.1
Basic Information
- Insect
- Cryptocephalus moraei
- Gene Symbol
- lrrfip2
- Assembly
- GCA_946251935.1
- Location
- CAMIUL010000530.1:7850-23423[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-110 9.1e-107 357.1 30.2 1 300 46 331 46 331 0.95 2 2 0.15 1.1e+03 -1.0 3.2 6 230 362 397 332 406 0.45
Sequence Information
- Coding Sequence
- ATGGTCGCCGTCGGAGGCTCGAGGTTCGGCTCGCTCGCGCGCCTGATTCGAACCCCATCGATCTCCGATTGCCTCTACGAGAAGCAGAGGCCCGACGTGCTGCTCGTCACGACGGTCTCGATGTCCAAGAAGGATGCGGAAGCGAGGTTATGGGCGAAACGTCAGGCGAGAGCTGAAGCTAGAGAGATACGTATGCGGGAGCTCGAGAGGCAACAAAAGGAACAAGAGGAGAACGCCGACAGGCAATTCGACATGTTAACAGAACCGATCTGTAGGACCCCCAGGAACAACGTCAGCAGCAGATACTTGTCGAGCAGAAGGAGCTCGGAGGACTCTCTGGAGGACGGGGGCAGCCTCAGGGAACTGAGGCATGAGCTCAAGGAGGTAGAGGAGAAGTTCCGGAAGGCGATGATAGCAAACGCTCAACTGGACAATGATAAGACGGCCCAGACGTATCAGTTGGAACTCCTGAAGGATAGGTTGGAGGAGCTGGAGGAGGAGCACTCGCAACTGAAACGGGAGCATAGGGAGAAGTGTAGGGAGCACGACCAGCTGAAGAGGCTCTGCGCCAGCCTGAAAGATAAGCTGGCCGTAACCGAGGCGGAGCTGAGCGAGAGGGACAGGTTGATAGAGGAGAAGGGCCTTGTCGTGGTCAGCGAGGAGTCGGCGCCGAACGCCGATGGCACGTCCGAACCACCCAAGAAGGTACTCGTCAGCGCTGAGAACGCGCAGCTGTTGGAGAGCATAGGCGACGGCAGTTTAGACGTTCGACTCGCTCGATTCGCCAAGGAGAAAAGCGATCTGCTGGATCAAATTAGTCATTTACAGTTAGAACTAGAAGAGGAGAAGAACAAGAGGCGGAAGTACAGCATTTCGGGACTGTTGAACGGTCCATCTTCGGATTACGATTACGACGACATTCAAAGGGAGGCGAGCAAACAGCTGGCAGATTACAAGTTCCGAGCTCAGAAGGCCGAACAGGACGTCGCCACTTTGCAGGCGACTGTGGCGAGGCTCGAGAGCCAAGTGATACGATACAAGACGGCCGCCGAGGTATCGGAACAGAGCGAGGAGGCCCTGAAGGCGGAGAAACGGAAACTGCAGCGAGAGGCGAGAGATGCACTAACAAGAGCAGAAGAACTGGAAACATCCAACACACACCTCCTAAAAAGGTTAGACAAGTTAAAAAATGCGAAATCCGCCCTTTTGAAAGAACTTTGA
- Protein Sequence
- MVAVGGSRFGSLARLIRTPSISDCLYEKQRPDVLLVTTVSMSKKDAEARLWAKRQARAEAREIRMRELERQQKEQEENADRQFDMLTEPICRTPRNNVSSRYLSSRRSSEDSLEDGGSLRELRHELKEVEEKFRKAMIANAQLDNDKTAQTYQLELLKDRLEELEEEHSQLKREHREKCREHDQLKRLCASLKDKLAVTEAELSERDRLIEEKGLVVVSEESAPNADGTSEPPKKVLVSAENAQLLESIGDGSLDVRLARFAKEKSDLLDQISHLQLELEEEKNKRRKYSISGLLNGPSSDYDYDDIQREASKQLADYKFRAQKAEQDVATLQATVARLESQVIRYKTAAEVSEQSEEALKAEKRKLQREARDALTRAEELETSNTHLLKRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01226914;
- 90% Identity
- iTF_00392757;
- 80% Identity
- -