Clev010038.1
Basic Information
- Insect
- Crematogaster levior
- Gene Symbol
- tfip11
- Assembly
- GCA_901521435.1
- Location
- CABEGB010000029.1:101974-108328[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4e-101 6.8e-97 325.3 17.0 1 275 384 652 384 652 0.98 2 2 0.0088 1.5e+02 2.7 0.1 245 272 667 694 658 697 0.86
Sequence Information
- Coding Sequence
- ATGTCTGAGGACGAAGTGGAGAGCTTCGAAATCACTGATTATGATTTAGACAATGAATTTAACATAGCTCGTCCTCGCCGCAAACTTTCGAAGAAACAACAAATGTTAGGAATATGGGCAGATGACAGTGATGAAGATGAATTATCTGCCAGACCATCTTTCAAGACCTTTAACAAAGGTCCTAAAAATTATACAGCACCAGTTAATTTTGTTGCTGGTGGTATTCAACAGTCAGGAAAACCAAAGGAAAAGgacgaaaaaaatgaagatgaagaagagACGCAAGAAACAAAGTACAGTAGCTCGAGTTCAGAAGATGAGAGGCTAAATAGTTCCAAATCACGTCCATCTTTCTCCTTGAATTTGGACAGTGACATTGCGGGTCTACGTAAAAAGCGTAATCAAGTAAATCCATTGTTGATGAAAAGTGGAATGGGTAGTTGGGAAGTACATACAAAAGGCATTGGAGCTAAATTGTTGCTACAGATGGGATTTGAACCTGGTAAAGGTTTAGGTAAACAATTGCAAGGAATAAGCGCCCCAGTGGAGGCACATCTCAGAAAAGGAAGAGGCGCGATTGGCGCGTATGGTCCGGAAAAGACGCCGAAGATTCCCGAGAAAAAGAAGGATGACGATGGGGAGGAAGCAAAAGAATCCAAGATATCACAATGGCGGAAGGGTGATAACAGCAACAAGAAAAAAGTCAGATACTGTTATAGAAGTGTGGATCAAGTTTTGGAAGATGGAAAACTGAAGCCTAATAGAAAACTTCCAGTGTCTAACGATATGAGCAGAGTTAAAGTTATCGATATGACTGGACCAGAACAAAGGATTCTTAGCGGATATCATGCAATAGCTGGCGGTCAGCAATGTCCTGACGAAACTATAATTACATCCGACAAGAAATCGAAAGTGAACTTTGCCTTGCCCGAATTGCagcataatttaaatttacttgtggACATGTGTGAACAAGATATTATCCAAAATGACCGGCGAATGAGGCATTTAAATGATAGAGTGGTTGCTTTAGAAgcagagaaaaagaatttatccAGGATCGTAGATCAGCATAGTCAACTGATTGACACGTTGGAGAATGTGTTTGTGATTGTGGACAGATTGATGAATGAGACGAATGAATTGTCACTGCAAGAAACTGCAGAGGCTTTCAGAAATTTGCAAGACAATTATTACGAAGAGTATAAGATGTATGAACTTGGTGAATTAGCCAGCAGTTTTGTAGCaccaaagataaaagattatCTGCTCAATTGGAATCCATTGATGCAACCGAAGCAAccgattaaattatttgaacaatGGAAGGATATCTTGGAGAATGGAACCTGTACAACTTTTCAGACTCGGACTATGAATTCATATGATCAACTAGTATGGAATGCATGGATGCCATCGATTAGAGGAGCTATACAGCAGTGGACATGTAGGCAGCCTGAAcctttaattgaattaatagaGGACTGGATGCCATTATTATCTAATTGGATCTTGgaaaatatattagatttattgGTATTACCGAAATTGACATTGGAGGTAGAAGAATGGAATCCTCTTACCGATACTGTACCTATTCACACATGGATTCATCCTTGGTTGCCATTAttacGAAATCGCTTGGATACTCTGATTTATCCAATAATACGTAGAAAACTCGGATCTGCATTAGGAGGTTGGCATCCATCAGATAGATCCGCTAGATTAATGCTGCAACCTTGGGCAGAAGTGTTTGCCAAGGGAGACATGGAAGCCTTCTTAGTCAAGAACATTATTCCAAAATTACAAATAGCTTTATCAGAGTTTGTCATAAATCCACATCAACAGCATTTAGATCAATGGAACTGGGTATATGAGTGGAAGGAGTTAATCCCTGTTCATATCATGGCAGGATTGCtcgataaattcttttttccaaaatgGCTACAAGTCTTGGCGCTTTGGCTCAACCATTCGCCTAATTATGATCAAGTTACAACATGGTACATGGGTTGGAAAGGGATGTTGAACGATAAGATACTAGCAGAACCAGTAATAAAAgAACACTTCAAAAAAGCTTTGGACATGATGAACAGAGCCGTTAGTGGACCACAAAATCATCAACCTGGCGCACTAGAACAGGTTTCCTATTTAACAAGCTTAGAAAGAACTCAGCCGACAATGTCTCAGATGACACCGATTGCGCAGCCGAGAATGGAGAGACTCGCAGAGGCAGTACGAACGGCCTCGCAAATTCCACAAGGTTTCAAAGATTTTGTACAAAAGAAATGCGAAGAGAGaggtatattatttatgcCGATCCCAAACAGATATAAAGAGGCTAAGCAAGTGTACAAAGTGGGCAATGTTCAAGCTTATATCGATAGCAATGTCTTATTCGTGTGTCATAATGGTACAAATTGGATGCCAACACATATAAATGCCTTGCTAGATATGTCtgaactttaa
- Protein Sequence
- MSEDEVESFEITDYDLDNEFNIARPRRKLSKKQQMLGIWADDSDEDELSARPSFKTFNKGPKNYTAPVNFVAGGIQQSGKPKEKDEKNEDEEETQETKYSSSSSEDERLNSSKSRPSFSLNLDSDIAGLRKKRNQVNPLLMKSGMGSWEVHTKGIGAKLLLQMGFEPGKGLGKQLQGISAPVEAHLRKGRGAIGAYGPEKTPKIPEKKKDDDGEEAKESKISQWRKGDNSNKKKVRYCYRSVDQVLEDGKLKPNRKLPVSNDMSRVKVIDMTGPEQRILSGYHAIAGGQQCPDETIITSDKKSKVNFALPELQHNLNLLVDMCEQDIIQNDRRMRHLNDRVVALEAEKKNLSRIVDQHSQLIDTLENVFVIVDRLMNETNELSLQETAEAFRNLQDNYYEEYKMYELGELASSFVAPKIKDYLLNWNPLMQPKQPIKLFEQWKDILENGTCTTFQTRTMNSYDQLVWNAWMPSIRGAIQQWTCRQPEPLIELIEDWMPLLSNWILENILDLLVLPKLTLEVEEWNPLTDTVPIHTWIHPWLPLLRNRLDTLIYPIIRRKLGSALGGWHPSDRSARLMLQPWAEVFAKGDMEAFLVKNIIPKLQIALSEFVINPHQQHLDQWNWVYEWKELIPVHIMAGLLDKFFFPKWLQVLALWLNHSPNYDQVTTWYMGWKGMLNDKILAEPVIKEHFKKALDMMNRAVSGPQNHQPGALEQVSYLTSLERTQPTMSQMTPIAQPRMERLAEAVRTASQIPQGFKDFVQKKCEERGILFMPIPNRYKEAKQVYKVGNVQAYIDSNVLFVCHNGTNWMPTHINALLDMSEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00898736;
- 90% Identity
- iTF_01421552;
- 80% Identity
- -