Clev015108.1
Basic Information
- Insect
- Crematogaster levior
- Gene Symbol
- Bgb
- Assembly
- GCA_901521435.1
- Location
- CABEGB010000714.1:940127-940546[+]
Transcription Factor Domain
- TF Family
- CBF
- Domain
- CBF_beta domain
- PFAM
- PF02312
- TF Group
- Beta-Scaffold Factors
- Description
- Core binding factor (CBF) is a heterodimeric transcription factor essential for genetic regulation of hematopoiesis and osteogenesis. The beta subunit enhances DNA-binding ability of the alpha subunit in vitro, and has been show to have a structure related to the OB fold [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2e-33 3.4e-29 102.5 0.0 93 160 3 70 2 77 0.97
Sequence Information
- Coding Sequence
- ATGTTCCAGGTACATCTACGCTCGCACTTGATCATGAATGGCGTGTGCGTGAGGTGGCGGGGTTGGATTGATCTGGATCGGTTGGACGGTGTCGGCTGTCTCGAATACGACGAGGAGCATGCTGCCGAGGAGGACGCGCTACTGCGCGACCAGCTAGAGCGTTACAACCAGCGACTACGTGATTTCGAGGAGAAGCAGCGGACCTACCGGGGTGGTCCGGCATCGGCTGCGCAGCCGCCACATCTCAATCATCACTATCACCACGACACACACCACGCgagtcatcatcatcatcatcacggTCACCACAGCCGGCACGTGGGTGGCGCGGGCGCCACGGGTGCTACCGCGACCGGCATCGAGCCCCACTTGCCACACCGCCAGGATCCCGAAATGGAGGTGCGACTACGGGCCTACTGA
- Protein Sequence
- MFQVHLRSHLIMNGVCVRWRGWIDLDRLDGVGCLEYDEEHAAEEDALLRDQLERYNQRLRDFEEKQRTYRGGPASAAQPPHLNHHYHHDTHHASHHHHHHGHHSRHVGGAGATGATATGIEPHLPHRQDPEMEVRLRAY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01228784; iTF_00393365; iTF_00306023; iTF_01077237; iTF_00867910; iTF_00867160; iTF_01244986; iTF_01423408; iTF_01422002; iTF_01422687; iTF_00109593; iTF_00126465; iTF_00264035; iTF_00182410; iTF_00127948; iTF_01405453; iTF_01406992; iTF_00884818; iTF_01408820; iTF_00765305; iTF_01015577;
- 90% Identity
- iTF_00867910;
- 80% Identity
- -