Amia001818.1
Basic Information
- Insect
- Aphaenogaster miamiana
- Gene Symbol
- Bgb
- Assembly
- GCA_003063725.1
- Location
- NJRN01000130.1:509746-510168[-]
Transcription Factor Domain
- TF Family
- CBF
- Domain
- CBF_beta domain
- PFAM
- PF02312
- TF Group
- Beta-Scaffold Factors
- Description
- Core binding factor (CBF) is a heterodimeric transcription factor essential for genetic regulation of hematopoiesis and osteogenesis. The beta subunit enhances DNA-binding ability of the alpha subunit in vitro, and has been show to have a structure related to the OB fold [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.1e-33 1.4e-29 103.3 0.0 93 160 3 70 2 77 0.97
Sequence Information
- Coding Sequence
- ATGTTCCAGGTACACCTGCGTTCGCATCTGATCATGAACGGCGTGTGCGTGAGGTGGCGAGGTTGGATCGACCTAGAGCGGCTGGACGGCGTCGGCTGTCTCGAGTACGACGAGGAGCACGCCGCCGAGGAGGACGCGCTGCTGCGCGACCAGCTCGAACGTTACAACCAGCGGCTGCGAGATTTCGAGGAGAAGCAGCGGACGTACCGGGGTGGTCCGGCGTCGGCCGCGCAGCCGCCGCATCTCAATCACCACTATCACCACGACACGCATCACGCGACTAgccatcaccatcatcatcacggCCACCACAGCCGGCACGTGGGGGGCGCGGGGGCTACGGGGGCCACCGCGACCGGAATCGAGCCCCACTTGCCGCACCGTCAGGATCCCGAGATGGAGGTGCGACTGCGGGCCTACTGA
- Protein Sequence
- MFQVHLRSHLIMNGVCVRWRGWIDLERLDGVGCLEYDEEHAAEEDALLRDQLERYNQRLRDFEEKQRTYRGGPASAAQPPHLNHHYHHDTHHATSHHHHHHGHHSRHVGGAGATGATATGIEPHLPHRQDPEMEVRLRAY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00385045;
- 90% Identity
- iTF_00867910;
- 80% Identity
- iTF_00126465; iTF_00765305;