Csor026048.1
Basic Information
- Insect
- Cosmopolites sordidus
- Gene Symbol
- dmd-4
- Assembly
- GCA_031761425.1
- Location
- JARFXV010000789.1:654298-667943[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.1e-25 1.1e-20 74.8 11.2 1 47 9 55 9 55 0.98 2 2 0.022 3.8e+02 2.5 0.4 29 35 242 248 240 256 0.86
Sequence Information
- Coding Sequence
- ATGCTGACTAGTAGTAGAGCTGCTCGAGTGCCCAAATGCGCGAGATGTCGAAATCACGGCATGATTTCAACATTGAGAGGTCACAAGAAGCAGTGCATCTACAAGAACTGTAACTGTGCCAAATGCGGCTTGATTAAAGAAAGGCAACGGATAATGGCTGCCCAGGTCGCATTGAAGCGCCAACAAGCAGCTGAAGACGCCATAGCTCTTCATCTAGCTTCAGCAGAAAGTGGTACTACCTACGAATACCTACCACCAGGCAGAATATACGGTATGCAAGTCACATCGCCGGAAACAGAAACAACTGAAACTCCCACCTCATCGGAGACGGTTGCTCAAGACCAAGACAAACCTGACGTCACCATTAGCCCTGGATCAGTGGAGATGTTAAGCAAACTATTTCCCAACAAGAAGAGAACAGTTTTGGAGCTGGTCTTAAAGAGGTGTAACCATGATCTGTTGAAAGCCATCGAGCATTTTAACTTGAACAACACGAAATCTTCTTGTGGAAACGAGTCGGACTCGAGCAGCACGAAAGAAGAGCCATCGTCAGCGTTCAAACCTGTGTCTAATTCCACGAAACCCACTCAAAAACCATCAATATATCCCGGTATCCACGCCGCTACTGTACCGATGATTTCTAGTGAAGTGTTCAGTTTCTATCCGTTCTTTCCAATTTTTCCTAAGCCCATCGTGAGGAATCCAGTGTACGTTCCAGGGTTCTGCGATTGCGACCAATGCAAGCATGGAGTGTATGGACAAATAGATAACAGacaatga
- Protein Sequence
- MLTSSRAARVPKCARCRNHGMISTLRGHKKQCIYKNCNCAKCGLIKERQRIMAAQVALKRQQAAEDAIALHLASAESGTTYEYLPPGRIYGMQVTSPETETTETPTSSETVAQDQDKPDVTISPGSVEMLSKLFPNKKRTVLELVLKRCNHDLLKAIEHFNLNNTKSSCGNESDSSSTKEEPSSAFKPVSNSTKPTQKPSIYPGIHAATVPMISSEVFSFYPFFPIFPKPIVRNPVYVPGFCDCDQCKHGVYGQIDNRQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01307283; iTF_00196249; iTF_01187876; iTF_01240706; iTF_00431476; iTF_00116829; iTF_01351743;
- 90% Identity
- -
- 80% Identity
- -