Sory000281.1
Basic Information
- Insect
- Sitophilus oryzae
- Gene Symbol
- dmd-4
- Assembly
- GCA_002938485.2
- Location
- NW:1240464-1255995[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.2e-25 2.9e-21 74.7 11.2 1 47 9 55 9 55 0.98 2 2 0.028 1.3e+02 2.2 0.8 29 35 243 249 241 256 0.87
Sequence Information
- Coding Sequence
- atgTTAACAACAAGCAGAGCTGCAAGGGTGCCAAAATGTGCAAGATGTCGGAACCATGGCATGATTTCTACGTTGAGAGGTCACAAGAAACAGTGCATTTACAAGAATTGCAACTGTGCAAAATGTGGATTAATCAAAGAACGACAACGCATCATGGCAGCCCagGTAGCTCTAAAACGCCAGCAAGCAGCTGAAGATGCCATAGCGCTTCATCTAGCTTCGGCAGAGAGTGGAACTACCTACGAGTACCTTCCTCCAGGACGAATCTACGGTATGCAAGTAACTTCTCCCGAAACAGAGACTGAAGACAGTCCCCCAGCAGTGGAGAAATCTTCGCCGGATCCTGCAAAAGATGACGTAGCAATAAGCCCGGGTTCCATAGAGATGCTGGGCAAGTTGTTTCCAAACAAGAAGAGAACCGTTTTGGAGTTGGTACTCAAAAGATGTAACCACGACTTGCTCAAAGCAATCGAACACTTCAACTTGAACAACGGCAAGACTTCGTGCGGAAATGATTCCGATTCAGGAAGTACCAAGGAGGAAACGTCTTCTTCAGCCTTTAAGCCAGTGTCAAGCTCGGCAAAAACATCTTCCAAACCACCACTGTACCCTGGATTACACGCCACTACTGTACCGATGATATCCAGTGaggtttttagtttttatccattttttccaatttttccgAAGCCCATTGTGAGGAATCCCGTGTACGTCCCTGGATTTTGTGATTGCGAGCAGTGCAAGCACGGTTCTGCTTATAGTTCGGTAGATAATAGATCATAA
- Protein Sequence
- MLTTSRAARVPKCARCRNHGMISTLRGHKKQCIYKNCNCAKCGLIKERQRIMAAQVALKRQQAAEDAIALHLASAESGTTYEYLPPGRIYGMQVTSPETETEDSPPAVEKSSPDPAKDDVAISPGSIEMLGKLFPNKKRTVLELVLKRCNHDLLKAIEHFNLNNGKTSCGNDSDSGSTKEETSSSAFKPVSSSAKTSSKPPLYPGLHATTVPMISSEVFSFYPFFPIFPKPIVRNPVYVPGFCDCEQCKHGSAYSSVDNRS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00376363;
- 90% Identity
- -
- 80% Identity
- -