Agra054649.1
Basic Information
- Insect
- Anthonomus grandis
- Gene Symbol
- dmd-4
- Assembly
- GCA_030068095.1
- Location
- CM057948.1:27187248-27188480[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6e-25 1.8e-20 74.8 11.2 1 47 9 55 9 55 0.98 2 2 0.056 1.6e+03 1.2 1.5 29 35 239 245 237 248 0.86
Sequence Information
- Coding Sequence
- atgCTATCAAACACAAGGGCGGCCAGAGTACCAAAATGCGCCCGGTGTAGAAACCACGGGATGATATCGACCCTAAGGGGTCACAAGAAACAGTGcatatacaaaaattgcaacTGCGCCAAGTGCGGATTGATTAAGGAAAGGCAAAGGATTATGGCTGCACAGgttgCACTTAAACGACAACAAGCGGCCGAAGATGCTATTGCCCTTCACCTAGCTTCAGCTGAAAGCGGTACCACATACGAATACCTGCCACCTGGCAGGATATTTGGTATGCAAGTGACATCTCCGGAAGCCGAAGGCACTGACGATCCTACACCAATTGAAAAAGAAGCTCAAGATAGTAAGGAGGACGTTAACGTAAGCCCCGGTTCTATTGAGATGCTCGGAAAACTATTCCCGAACAAGAAGAGGGCAGTATTAGAGTTAGTTTTAAAGAGATGTAACCATGACCTCCTAAAAGCGATCGAACACTTCAATCTAAAACCTAAGCAGTGTGACAACGAATCCGACTCAAGTAGCACTAAGGAAGAGTCTTTATCAGCGTTCAAGCCGGTCTCAAGTCCTCCCAAGAGCCCCTCGAAGCCCCCAAGCTATCTGGGGATGCACGGGGCAACAGTTCCGATGATATCCAGTGAGGTTTTCAGTTTTTACCCGTTTTTCCCTTTGTTCCCTAAACCGGTCATAAGGAATCCAGTGTACGTACCGGGGTTTTGTGATTGTGATCAGTGTAAGCATAGTTTGTATAGTTCTGTAGATAATAGACCGTAG
- Protein Sequence
- MLSNTRAARVPKCARCRNHGMISTLRGHKKQCIYKNCNCAKCGLIKERQRIMAAQVALKRQQAAEDAIALHLASAESGTTYEYLPPGRIFGMQVTSPEAEGTDDPTPIEKEAQDSKEDVNVSPGSIEMLGKLFPNKKRAVLELVLKRCNHDLLKAIEHFNLKPKQCDNESDSSSTKEESLSAFKPVSSPPKSPSKPPSYLGMHGATVPMISSEVFSFYPFFPLFPKPVIRNPVYVPGFCDCDQCKHSLYSSVDNRP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00376363;
- 90% Identity
- -
- 80% Identity
- -