Cpyr031542.1
Basic Information
- Insect
- Cosmia pyralina
- Gene Symbol
- -
- Assembly
- GCA_946251865.1
- Location
- CAMIUE010001250.1:129962-133483[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.1e-07 0.00016 22.7 0.0 1 40 14 54 14 57 0.92
Sequence Information
- Coding Sequence
- ATGCCCAGGcattataagaaaaaaactaaCCGCACATTTTCTCCTGAGGCACTAAGAAAAGCCATAATAGATGTACGATCCAAAAAATTTAGCATCAGGAAGAGTGCGGCTGAACATGGTGTTAGCAAATCAAgactttttgattattttaaaaagactAAAGGTGAGGATAACATTGAGTCTGTTGATTTAACAACTAATTTCAGAAAAAGCCAAGTTTTTCCTCCATTCATGGAAGCTGCTTTGgctgaatatttaattaaatgctCAACAATGTTTCATGGTCTCACACCTAAAGCTACTAGACGCTTAGCTTATGAGTATGCAGAGAGAAATAATGTAAAGTATCCGCCAAAATGGAAAGAAACAAAATCTGCAGGACCTGATTGGTTCTCATCATTTTTAAAACGTCACCCTACCCTTTCAATACGGACACCTGAAGCCACGAGTCTTGCACGAATGACGAGTTTCAATAGAACAACTGTAGCAGAATTTCAAAACAAGCTTGAAGATATTTATAATCTGGATGAAACCGGGATAACCACAGTGCAGCGTGTTCCAAAAGTCATTGCTCAAAAAGGGCAACATCAAGTAGGACAAGTGACCTCGCGAGAAAGAGCTCTCCTCCTGGTAACACAGGTAGGAATCATAAGTGCAGCTGGTCATGCCTTACCACCGGTTTGGATATTTCCTCGTCACCGCTTTGACAAAAGGAAAATGATGCAAGGTATTCCAGATACTGCAGGTCTTGGTTTGGTTTACCCTTCTGGCTGGATGACAAGTGAGAATTTTTTGAAGGTGTTGGAATATTTTGCTCGGAATGTGCGTTGTTCTATAGAAAACAAGGTCTTGTTAATCATGGACAACCATGAATCCCATCTATCAGTGGATGGATTAAATTTCTGCAAAACAAATGGGATCATCATTCTTACCCTGCCACCACACACGTCAAATAAGCTGCAACCACTGGATCGCACGGTGTTTGGGCCATTTAAGACTTTTTACAACAGTGGTTTGGATTCATGGATGTTAGCACACCCTGGGCAAACTATTAGCATTTATGACATCCCACAAATTAGTCTTCTAGCTTGGGATAGAGCTGCCAATCCTATGAATGTAAAATCTGGTTTCAGATGTACAGGTATTTGGCCCTTTGATAGAAATATATTTACGGATGTAGATTTCTTATCATTCTATGTGACAGATCGACCGGAGACTGATCAATCTAATGTTCGTGAACAATCTCAAAACAGTGATGATGAATGTGTCTCACCTTCAGTGATTGGACAACTGTTCACATCAAATCCGTTGGATGATGATGGCAATGATGCACAAACACTAGCGATTTACAGGACCCCATCAATTTCCTCAGTTCATAGTGCTGATGGTAATATCGACATGCCATCAACTAGTTCCAATGTTCCAGTTCCAGAAACAACCcgaaactataataaaaaaataattgccaaTGATCTATCAGATCgttcagatgatgatgagaattATGAACTAACATCAGCAATTCTCACAGCTCATAGAACCCCATCAAAAACTCCATCAATTATCTCGGCTCATAGTGCTGATCTTAATATTGACGTGCCATCAACTTCGAATGTCCCAGGATCatctacaaacaaacataaagcAATAATTGATAAAGTCTATATCTCAACTTCGCCAAGTCGACAAAGGTCCATCGATTCATTTGTTTCCCTGGAGCAAATTAGTCCTTTTCCGAAAGCAGCTCCACGGAAATCTAACATGAATAATCGAGGACGACGTAAAGGAAAATGTATGATAGCCACTGATACCCCTGAAAAGGAAGCACTTGAAGCTGCAAAAAAAGCAAGAATGACAAAGACATCAAAGAAGACAGTTAAGAAGAAGGTTTTGCAagaaaaaaagttgaaaaagaAAACGATTCCCCAAGTAACATCATCAGATGAGTCAACAGACCAACACATTTCTTCTAATGACAGTACATACGACATTGATGATGAAGAATTTGATGACAACAATGCTGATACTTCTAATGTGCCTGAAGGGAGGTTTATAATTGTTAAAGTCTatggatttggaaaaaaatcagGCCGTAACTATGCAGCAAAGATTGTAAAAATAACGGCAGGTGGTTATAATGTCGAGTTCCTTCAGAAGACAAGAGGCCTCGCTTTCAGGGCATGA
- Protein Sequence
- MPRHYKKKTNRTFSPEALRKAIIDVRSKKFSIRKSAAEHGVSKSRLFDYFKKTKGEDNIESVDLTTNFRKSQVFPPFMEAALAEYLIKCSTMFHGLTPKATRRLAYEYAERNNVKYPPKWKETKSAGPDWFSSFLKRHPTLSIRTPEATSLARMTSFNRTTVAEFQNKLEDIYNLDETGITTVQRVPKVIAQKGQHQVGQVTSRERALLLVTQVGIISAAGHALPPVWIFPRHRFDKRKMMQGIPDTAGLGLVYPSGWMTSENFLKVLEYFARNVRCSIENKVLLIMDNHESHLSVDGLNFCKTNGIIILTLPPHTSNKLQPLDRTVFGPFKTFYNSGLDSWMLAHPGQTISIYDIPQISLLAWDRAANPMNVKSGFRCTGIWPFDRNIFTDVDFLSFYVTDRPETDQSNVREQSQNSDDECVSPSVIGQLFTSNPLDDDGNDAQTLAIYRTPSISSVHSADGNIDMPSTSSNVPVPETTRNYNKKIIANDLSDRSDDDENYELTSAILTAHRTPSKTPSIISAHSADLNIDVPSTSNVPGSSTNKHKAIIDKVYISTSPSRQRSIDSFVSLEQISPFPKAAPRKSNMNNRGRRKGKCMIATDTPEKEALEAAKKARMTKTSKKTVKKKVLQEKKLKKKTIPQVTSSDESTDQHISSNDSTYDIDDEEFDDNNADTSNVPEGRFIIVKVYGFGKKSGRNYAAKIVKITAGGYNVEFLQKTRGLAFRA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01532988; iTF_00071370; iTF_00071371; iTF_00071372; iTF_01534768; iTF_01533874; iTF_00071380; iTF_00071382; iTF_01532986; iTF_01532987; iTF_01532989;
- 90% Identity
- iTF_00374027;
- 80% Identity
- -