Basic Information

Insect: Amphipoea oculea
Gene Symbol: -
Assembly: GCA_945859585.1
Location: CAMAOF010000439.1:747224-749179[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 9.5e-08 2.6e-05 24.2 0.0 1 40 14 54 14 57 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	9.5e-08	2.6e-05	24.2	0.0	1	40	14	54	14	57	0.92

Sequence Information

Coding Sequence: ATGCCCAGGCATTATAAGAAAAAAACTAACCGCACATTTTCTCCTGAGGCACTAAGAAAAGCCATAATACATGTACGATCCAAAAAATTTAGCATCAGGAAGAGTGCGGCTGAACATGGTGTTAGCAAATCAAGACTATTTGATTATTTTAAAAAGACTAAAGGTGAGGATAACATTGAGTCTGTTGATTTAACAACTCATTTCAGAAAAAGCCAAGTTTTTCCTCCATTTATGGAAGCTGCTTTGGCTGAATATTTAATTAAATGCTCAACAATGTTTCATGGTCTCACACCTAAAGCTACTAGACGCTTAGCTTATGAGTATGCAGAGAGAAATAATGTAAAGTATCCGCCAAAATGGAAAGAAACCAAATCTGCAGGACCTGATTGGTTCTCATCATTTTTAAAACGTCACCCTACCCTTTCAATACGGACACCTGAAGCCACGAGTCTTGCACGAATGACGAGTTTCAATAGAACAACTGTAGCAGAATTTCAAAACAAGCTTGAAGATGTTATAACACGGTTTAATTTCACACCAACCCAAATTTATAATCTGGATGAAACCGGGATAACCACAGTGCAGCGTGTTCCAAAAGTCATTGCTCAAAAAAGGCAACATCAAGTAGGACAAGTGACCTCGCGAGAAAGAGGAGAGCTGGTAACACAGGTAGGAATCATAAGTGCAGCTGGTCATGCCTTACCACCGGTTTGGATATTTCCTCGTCACCGCTTTGACAAAAGGAAAATGATGCAAGGTATTCCAGATACTGCAGGTCTTGGTTTGGTTTACCCTTCTGGCTGGATGACAAGTGAGAATTTTTTGAAGGTGTTGGAATATTTTGCTCGGAATGTGCGTTGTTCTATAGAAAACAAGGTCTTGTTAATCATGGACAACCATGAATCCCATCTATCAGTGGATGGATTAAATTTCTGCAAAACAAATGGGATCATCATTCTTACCCTGCCACCACACACGTCAAATAAGCTGCAACCACTGGATCGCACTGTGTTTGGGCCATTTAAGACTTTTTACAACAGTGGTTTGGATTCATGGATGTTAGCACACCCTGGGCAAACTATTAGCATTTATGACATCCCACAAATTAGTCTTCTAGCTTGGGATAGAGCTGCCAATCCTATGAATGTAAAATCTGGTTTCAGATGTACAGGTATTTGGCCCTTTGATAGAAATATATTTACGGATGTAGATTTCTTATCATCCTATGTGACAGATCGACCGGAGACTGATCAATCTAATGTTCGTGCACAATCTCAAAACAGTGTTGATGAATGTGTCTCACCTTCAGTGATTGGACAACTGTTCGCATCAGATCGGTTGGATGATGATGGCAATGATGCACAAACACTAGCGATTCCTACAGTTTACAGGACCCCATCAAGAACTCCATCAATTTCCTCAGTTCATAGTGCTGATGGTAATATCGACATGCCATCAACTAGTTCCAATGTTCCAGTTCCAGAAACAACCCGAAACTATAATAAAAAAATAATTGCCAATGATCTATCAGATCGTTCAGATGATGATGAGAATTATGAACTAACATCAGCAATTCTCACAGCTCATAGAACACCATCAAAAACTCCATCAATTATCTCGGCTCATAGTGCTGATTTTAATATTGACGTGACATCAACTTCGAATGTCCCAGGATCATCTACAAACAAACATAAAGTAATAATTGATAAAGACTATATCTCAACTTCGCCAAGTCGACAAAGGTCCATCGATTCATTTGTTTCCCTGGAGCAAATTAGTCCTTTTCCGAAAGCAGCTCCACGGAAATCGAACATGAATAATCGAGGACGACGTAAAGGAAAATGTATGATAGCCACTGATACCCCTGAAAAGGAAGCACTTGAAGCTGCAAAAAAAGCAAGAATGACAAAGACATCAAAGAAGACGGTTAAGAAGAAGGTTTTGCAAGAAAAATAG
Protein Sequence: MPRHYKKKTNRTFSPEALRKAIIHVRSKKFSIRKSAAEHGVSKSRLFDYFKKTKGEDNIESVDLTTHFRKSQVFPPFMEAALAEYLIKCSTMFHGLTPKATRRLAYEYAERNNVKYPPKWKETKSAGPDWFSSFLKRHPTLSIRTPEATSLARMTSFNRTTVAEFQNKLEDVITRFNFTPTQIYNLDETGITTVQRVPKVIAQKRQHQVGQVTSRERGELVTQVGIISAAGHALPPVWIFPRHRFDKRKMMQGIPDTAGLGLVYPSGWMTSENFLKVLEYFARNVRCSIENKVLLIMDNHESHLSVDGLNFCKTNGIIILTLPPHTSNKLQPLDRTVFGPFKTFYNSGLDSWMLAHPGQTISIYDIPQISLLAWDRAANPMNVKSGFRCTGIWPFDRNIFTDVDFLSSYVTDRPETDQSNVRAQSQNSVDECVSPSVIGQLFASDRLDDDGNDAQTLAIPTVYRTPSRTPSISSVHSADGNIDMPSTSSNVPVPETTRNYNKKIIANDLSDRSDDDENYELTSAILTAHRTPSKTPSIISAHSADFNIDVTSTSNVPGSSTNKHKVIIDKDYISTSPSRQRSIDSFVSLEQISPFPKAAPRKSNMNNRGRRKGKCMIATDTPEKEALEAAKKARMTKTSKKTVKKKVLQEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00374020;
90% Identity: iTF_00374027;
80% Identity: iTF_00071371;