Basic Information

Insect: Cosmia pyralina
Gene Symbol: clz9
Assembly: GCA_946251865.1
Location: CAMIUE010001658.1:195200-197674[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 2.6e-07 5.7e-05 24.1 0.0 1 40 16 55 16 60 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	2.6e-07	5.7e-05	24.1	0.0	1	40	16	55	16	60	0.91

Sequence Information

Coding Sequence: ATGCCTCGTAACTATATAAGGAAATCATTACGGGCAACTTGTTATACTCCTGAGGACTTAGCGATTGCAATACAGAGAGTGGAGAATAAAGAATTAACCATGTACGCAGCAGCTAAGTTATATAACATACCTGTCGCTACGCTGCATAATCgcttacataaaaaaactggAATAAAAAGCAGTACTTTAGGGCGTCCACCGGTTTTGCCTCTTGAAATAGAAACCCAGTTGGCGAACGGACTTGCAGTATTAGAAAAATGGGGATTTGGATTGTCCAGAAAGGAAGTGTTTTCACTTGTAAGGGAATTCATTCATTTGAATGGAATATCAACACCATTTAATAGTGGAGTTCCAGGACCAGATTGGTTTACAAATTTTAGAAAACGACATAGATTATCACTAAAAAAGGCTCAACCTATTGAGCATGTCAGACGAAAGAATACAGATCCGTTCATTGTGGGTGAATATTTTAGTCTATTGCAGGCTACTCTAAAGACATTAGGTCTTGAACAAAGGCCAGAACTCATCTGGAACCTTGATGAGACTTCCGTTAGTTTGGATCCCTCTAAAACCAAAGTAGTTGGGCGAAAGGGTGCGCCATGCTCTCGAACAACTCACGGTACAGGTAAAGAACACATAACAGTACTAACATCAGTAAGTGCCGGCGGACAGAAACTGACTCCTTTAATCATATTTAAAGGTAAATATGTATGGGATACCTGGATGGCTGACACACGTAATTTAGAGTTATCTTACGCAGCTAGTAAAAGAGGATGGATGGAAACGGAAATATTCCACAATTAcatggaaaaaatatttattccagGACTTGGCGAAGAAAGGCCAGTTCTGGTAGTCTACGACGGTCATAGCACTCATGTTGATATAAAAGTGGTTGAGTTGGCACGAAAACATAATGtcacaatattaaaattacccCCACATACGTCTCATCTTTTACAGCCACTGGATGTGGCTGTATTTAAATCCTTCAAATCTAGCTGGGATGCCAAGTTAGTTGAATGGCAGCGACATAACGTTGGTGTGAAGCTACCTAAAAAAGTGTTTTCTAACTTATTTGCAGAAGTATGGAATAATACAAAATCTGAAACTATTATCAACGGCTttataaaaacaggaatatgtCCTTTTAATTCAGATGTAATTTCAGTCGATAAGTATGATCCAAGATCTTACAAGCGCTGGATAGAAAAGCATAAAATGGAAAACGTATTTCAGCCTCCACAACCTGTTCTACAATCAGACGTTGACTCTCCCGTGTCGTTACTTGAACTTAGCCTTAATGTAATTAATAGATGGATATGTGACGATGGGACAATTTATGACATTGAAGGTCCACAGTCTTCATTTTTGGTTCCTGAAACTTTTGAAACAGTTCACTTGCTGGTAGATGTGGCAAAACATGAAGAGCAGGCGTCATCATTTTTGACAAACCATACTCCACAGTCTTCATTTATGCTTCCTGAAACTTCTCAATCAGTCCATTTGCTGGTAAATGTAACAAAGCATGAAGAGCAGGCGTCATCATTTGTGGCAAACAACCAAAATGATTTACCGATTTGCCTATCTAATATTGCCTATAAAACAAAACCCATAACTAGTGCGGAGTCTAAAATTAAGATTATTTCTAATGAGGTAGTTAACTACCCTTACAGTTTTGAAGACCTCTTACTTCAAAAGGTTCAACAAAGTCCACGAACTAATATGAAAACAAAGAAGAAACGGGTGGCAATAGGGGCTGAGGTAATAACGGAGTCTTTGattcaaaataaaactaatactgAGATTGAAACACACAGACTACCAAGGAAGAAAgtgaaaagaaataataaagataCAGTACTTAAGGAAATAAATGCAtataatcagaaaaaaaatataaatggagAGACAAGTGAGACTAAAAAACAGATAGCTAAAAAAAGAGCTGATAAAAAGGATGGtaaccaaaagaaaaaaaagaaaactaaactAACGTTAAGTACCGACACAGAAAGTTCCAATAGCGAAACAGAGTTTATGACTGTAGATACCGATTCTGAATATGAAAATATGGACGACTACCTAAAACAATGCCTGAAAATCCAAGAAGATGAAGAAAACATTGAACCAGACGCAAAACTGCCTTTTGGCTTAAGCGACATAAAATTTTATGACGAAAGTtcgttacaattaaaaaaagaagACTGGCTTGTAGTTCAGTTCACAACGAAAAAAAGTGTCAAACATTTCATAGGTAGAATTTTATCGATTGATGACAAAATACCAGTTGTAAAATTTGTACGAAAGGTAAAACAGTCAAAATCTGAAACAACGTTTAGTTATCCTATTGTAGAAGATATCTGTGTTATTAAATCTGAAGCAGATATAATTTGTGTTTTACCTCAGCCCGTTATTTCTCGACGTGGTCAACTAATTTTTAACGTTGAtctcaataaatataatatccagtaa
Protein Sequence: MPRNYIRKSLRATCYTPEDLAIAIQRVENKELTMYAAAKLYNIPVATLHNRLHKKTGIKSSTLGRPPVLPLEIETQLANGLAVLEKWGFGLSRKEVFSLVREFIHLNGISTPFNSGVPGPDWFTNFRKRHRLSLKKAQPIEHVRRKNTDPFIVGEYFSLLQATLKTLGLEQRPELIWNLDETSVSLDPSKTKVVGRKGAPCSRTTHGTGKEHITVLTSVSAGGQKLTPLIIFKGKYVWDTWMADTRNLELSYAASKRGWMETEIFHNYMEKIFIPGLGEERPVLVVYDGHSTHVDIKVVELARKHNVTILKLPPHTSHLLQPLDVAVFKSFKSSWDAKLVEWQRHNVGVKLPKKVFSNLFAEVWNNTKSETIINGFIKTGICPFNSDVISVDKYDPRSYKRWIEKHKMENVFQPPQPVLQSDVDSPVSLLELSLNVINRWICDDGTIYDIEGPQSSFLVPETFETVHLLVDVAKHEEQASSFLTNHTPQSSFMLPETSQSVHLLVNVTKHEEQASSFVANNQNDLPICLSNIAYKTKPITSAESKIKIISNEVVNYPYSFEDLLLQKVQQSPRTNMKTKKKRVAIGAEVITESLIQNKTNTEIETHRLPRKKVKRNNKDTVLKEINAYNQKKNINGETSETKKQIAKKRADKKDGNQKKKKKTKLTLSTDTESSNSETEFMTVDTDSEYENMDDYLKQCLKIQEDEENIEPDAKLPFGLSDIKFYDESSLQLKKEDWLVVQFTTKKSVKHFIGRILSIDDKIPVVKFVRKVKQSKSETTFSYPIVEDICVIKSEADIICVLPQPVISRRGQLIFNVDLNKYNIQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00726298; iTF_00726299; iTF_00374015; iTF_00374016; iTF_00404837; iTF_00404836; iTF_00726296; iTF_00172815; iTF_00172847; iTF_00172816; iTF_00172848; iTF_00172817; iTF_00172849; iTF_00172850; iTF_01439869; iTF_01264483; iTF_01538693; iTF_01439866; iTF_00281176; iTF_01264491; iTF_01264493; iTF_01264494; iTF_01264495; iTF_00785948;
90% Identity: iTF_00172815;
80% Identity: iTF_00374016;