Acen015571.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Atethmia centrago
Gene Symbol
clz9
Assembly
GCA_905333075.2
Location
HG995372.1:2921514-2923883[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2e-07 5.6e-05 24.6 0.0 1 40 16 55 16 60 0.91

Sequence Information

Coding Sequence
ATGCCTCGTAATTATATCAGGAAATCGTTACGGGCAACTTGTTATACTCCTGAGGACTTGGCGATTGCAATACATAGAGTGGAGAATAAAGAATTGACCATGTATGCAGCAGCTAAGTTATATAACATACCTGTCGCTACGCTGCACAATCgcttacataaaaaaacaggAATAAAAAGCAGTACTCTAGGGCGTCCACCCGTTTTGCCTTTTGAAATAGAAACCCAATTGGCAAATGGACTAGCAGTATTAGAAAAATGGGGATTTGGGTTGTCAAGAAAGGAAGTGTTTTCACTTGTAAGGGAATTCGTTAATTTGAATGGGATATCGACACCATTTAATGGTGGAGTTCCAGGACCAGATTGGTTTACAAACTTTAGAAAACGAcatagattatcattaaaaaaggCTCAACCTATTGAGCATGTCAGACGAAAGAATACAGATCCGTTCATTGTGGGGGAATATTTTAGCCTATTGCAGTCTACTCTAAAGACATTAGGTCTAGAACAAAGGCCAGAACTCATCTGGAATCTTGATGAGACTTCAGTTTCTTTGGATCCCTCTAAAACCAAAGTAGTTGGGCGAAAGGGTGCGCCATGCTCTCGAACAACTCACGGTACAGGCAAAGAACATATAACAGTTCTAACAGCAGTAAGTGCCGGCGGACAGAAACTGACTCCTTTAATCATATTTAAAGGTAAATATGTATGGGACACCTGGATGGCTGACACACGTAATTTTGAGTTATCTTACGCAGCCAGTAAAAGAGGATGGATGGAGACGGAAATATTCCACAATTACatggaaaaagtatttattccgGGACTCGGCGAAGAAAGGCCTGTTCTAGTAGTCTACGACGATCATAGCACTCATGTTGATATAAAAGTGGTTGAGTTAGCACGAAAACATAATGTCACGATATTAAAATTACCCCCACATACGTCTCATCTTTTACAGCCACTGGATGTGGCTGtatttaaatcttttaaatctaGCTGGGACGCCAAGTTAGTTGAATGGCAGCGACATAACGTTGGTGTAAAGTTACCTAAAAGAGTGTTTTCTAACTTGTTTGCAGAAGTATGGCATAATACAAAATCTGAAAGTATTATCAAAGGCTTTATAAAAACCGGAATATGTCCTTTTAATTCAGATGTAATTTCAGTCGATAAATATGATCCAAGAGCTTACAAGCGCTGGATAGAAAAGCATAAAATGGAAAACGTATTTCAGCCTCCACAACCTGTTATGCAGTCAGATGATAATTCTCCCGGGTCGTTACTTGAACTTAGCCTTAATGTAATTAATATATGGATATGTGACGAAGGTACAATTTACGACCTTGAAGGTCCACAGTCTTCATTTTTGCTTCCTGAAACTTCTGAAACAGTCCACTTGCTAGTAGATGTGACAAAGCATGCAGAGCAGGCGTCATCATTTgtggcaaatgaccaaaatgatTTACCGATTTGCCTGTCTAATATTCAGAGAAAACCCATAACTAGTGCGGAGTCTAAAATTCAGATTATTTCTAATGAGGTAGTTAactacccttatagttttgaaGATCTCTTACTTCAAAAGGTTCAACAAAGTCCACGAACTAATACCAAAACAAAGAAGAGACGGGTGGCAATAGGGGCTGAGGTAATAACGGAGTCTttgattcaaaataaaactcaaactgACATTGAAACAGACAAAGTACCAaggaaaaaagtgaaaaaaaattatgaaggtACAATACTTaaggaaataaatacatataatcagAAAACGATGATAAGTGGAGAGACGAGTGAGACTAAAAAACAGATAGCTAAAAAAAGAGTTTATAAAAAAGATTGTAACCAAAAGAAGACTATTAAATCACGTCAaagtattaaaaagaaaaccgaCACAGAAAGTTCCGCTAGCGAACCAGAGTTTAAGACTGTAGATACCGATTCTGAATATGAAAATATGGAAGACTACATAGAACAATGCCTGAAAATGCAAGAAGACGAAGAAAACATTGAACCAGACGCAAAATTACCTTTCGGCTTAAGCGACATCAAATTTTATGACGAAAGTTCgttacaattaaaaaaagaagaCTGGCTAGTGGTTCAATTCACAACGAAAAAAAGTGTCAAACATTTCATAGGTAGAATTTTATCGATTGATGACAAAATACCAGTTGTAAAATTTGTACGAAAGGTGAAACAATCAAAATCTGAAACTACGTTTAGCTATCCTATCGTAGAAGATATCTGTGTTATTAAATCTAAAGCAGATATCATTTGTGTTTTACCTCAGCCCGCTATTTCTCGACGTGGCCAACTAATATTTAACGTTGAtctcaataaatataatatccagtaa
Protein Sequence
MPRNYIRKSLRATCYTPEDLAIAIHRVENKELTMYAAAKLYNIPVATLHNRLHKKTGIKSSTLGRPPVLPFEIETQLANGLAVLEKWGFGLSRKEVFSLVREFVNLNGISTPFNGGVPGPDWFTNFRKRHRLSLKKAQPIEHVRRKNTDPFIVGEYFSLLQSTLKTLGLEQRPELIWNLDETSVSLDPSKTKVVGRKGAPCSRTTHGTGKEHITVLTAVSAGGQKLTPLIIFKGKYVWDTWMADTRNFELSYAASKRGWMETEIFHNYMEKVFIPGLGEERPVLVVYDDHSTHVDIKVVELARKHNVTILKLPPHTSHLLQPLDVAVFKSFKSSWDAKLVEWQRHNVGVKLPKRVFSNLFAEVWHNTKSESIIKGFIKTGICPFNSDVISVDKYDPRAYKRWIEKHKMENVFQPPQPVMQSDDNSPGSLLELSLNVINIWICDEGTIYDLEGPQSSFLLPETSETVHLLVDVTKHAEQASSFVANDQNDLPICLSNIQRKPITSAESKIQIISNEVVNYPYSFEDLLLQKVQQSPRTNTKTKKRRVAIGAEVITESLIQNKTQTDIETDKVPRKKVKKNYEGTILKEINTYNQKTMISGETSETKKQIAKKRVYKKDCNQKKTIKSRQSIKKKTDTESSASEPEFKTVDTDSEYENMEDYIEQCLKMQEDEENIEPDAKLPFGLSDIKFYDESSLQLKKEDWLVVQFTTKKSVKHFIGRILSIDDKIPVVKFVRKVKQSKSETTFSYPIVEDICVIKSKADIICVLPQPAISRRGQLIFNVDLNKYNIQ*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00374017;
90% Identity
iTF_01538693; iTF_00172847; iTF_00172816; iTF_00172848; iTF_00172849; iTF_00172850; iTF_01439869; iTF_00374017; iTF_00726298; iTF_00726299; iTF_00374015; iTF_00374016; iTF_00404837; iTF_00404836; iTF_00172817; iTF_00281176;
80% Identity
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