Cpyr011137.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Cosmia pyralina
Gene Symbol
clz9
Assembly
GCA_946251865.1
Location
CAMIUE010000362.1:207670-210144[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.6e-07 5.7e-05 24.1 0.0 1 40 16 55 16 60 0.91

Sequence Information

Coding Sequence
ATGCCTCGTAACTATATAAGGAAATCATTACGGGCAACTTGTTATACTCCTGAGGACTTAGCGATTGCAATACAGAGAGTGGAGAATAAAGAATTAACCATGTACGCAGCAGCTAAGTTATATAACATACCTGTCGCTACGCTGCATAATCgcttacataaaaaaactggAATAAAAAGCAGTACTTTAGGGCGTCCACCGGTTTTGCCTCTTGAAATAGAAACCCAGTTGGCGAACGGACTTGCAGTATTAGAAAAATGGGGATTTGGATTGTCCAGAAAGGAAGTGTTTTCACTTGTAAGGGAATTCATTCATTTGAATGGAATATCAACACCATTTAATAGTGGAGTTCCAGGACCAGATTGGTTTACAAATTTTAGAAAACGACATAGATTATCACTAAAAAAGGCTCAACCTATTGAGCATGTCAGACGAAAGAATACAGATCCGTTCATTGTGGGTGAATATTTTAGTCTATTGCAGGCTACTCTAAAGACATTAGGTCTTGAACAAAGGCCAGAACTCATCTGGAACCTTGATGAGACTTCCGTTAGTTTGGATCCCTCTAAAACCAAAGTAGTTGGGCGAAAGGGTGCGCCATGCTCTCGAACAACTCACGGTACAGGTAAAGAACACATAACAGTACTAACATCAGTAAGTGCCGGCGGACAGAAACTGACTCCTTTAATCATATTTAAAGGTAAATATGTATGGGATACCTGGATGGCTGACACACGTAATTTAGAGTTATCTTACGCAGCTAGTAAAAGAGGATGGATGGAAACGGAAATATTCCACAATTAcatggaaaaaatatttattccagGACTTGGCGAAGAAAGGCCAGTTCTGGTAGTCTACGACGGTCATAGCACTCATGTTGATATAAAAGTGGTTGAGTTGGCACGAAAACATAATGtcacaatattaaaattacccCCACATACGTCTCATCTTTTACAGCCACTGGATGTGGCTGTATTTAAATCCTTCAAATCTAGCTGGGATGCCAAGTTAGTTGAATGGCAGCGACATAACGTTGGTGTGAAGCTACCTAAAAAAGTGTTTTCTAACTTATTTGCAGAAGTATGGAATAATACAAAATCTGAAACTATTATCAACGGCTttataaaaacaggaatatgtCCTTTTAATTCAGATGTAATTTCAGTCGATAAGTATGATCCAAGATCTTACAAGCGCTGGATAGAAAAGCATAAAATGGAAAACGTATTTCAGCCTCCACAACCTGTTCTACAATCAGACGTTGACTCTCCCGTGTCGTTACTTGAACTTAGCCTTAATGTAATTAATAGATGGATATGTGACGATGGGACAATTTATGACATTGAAGGTCCACAGTCTTCATTTTTGGTTCCTGAAACTTTTGAAACAGTTCACTTGCTGGTAGATGTGGCAAAACATGAAGAGCAGGCGTCATCATTTTTGACAAACCATACTCCACAGTCTTCATTTATGCTTCCTGAAACTTCTCAATCAGTCCATTTGCTGGTAAATGTAACAAAGCATGAAGAGCAGGCGTCATCATTTGTGGCAAACAACCAAAATGATTTACCGATTTGCCTATCTAATATTGCCTATAAAACAAAACCCATAACTAGTGCGGAGTCTAAAATTAAGATTATTTCTAATGAGGTAGTTAACTACCCTTACAGTTTTGAAGACCTCTTACTTCAAAAGGTTCAACAAAGTCCACGAACTAATATGAAAACAAAGAAGAAACGGGTGGCAATAGGGGCTGAGGTAATAACGGAGTCTTTGattcaaaataaaactaatactgAGATTGAAACACACAGACTACCAAGGAAGAAAgtgaaaagaaataataaagataCAGTACTTAAGGAAATAAATGCAtataatcagaaaaaaaatataaatggagAGACAAGTGAGACTAAAAAACAGATAGCTAAAAAAAGAGCTGATAAAAAGGATGGtaaccaaaagaaaaaaaagaaaactaaactAACGTTAAGTACCGACACAGAAAGTTCCAATAGCGAAACAGAGTTTATGACTGTAGATACCGATTCTGAATATGAAAATATGGACGACTACCTAAAACAATGCCTGAAAATCCAAGAAGATGAAGAAAACATTGAACCAGACGCAAAACTGCCTTTTGGCTTAAGCGACATAAAATTTTATGACGAAAGTtcgttacaattaaaaaaagaagACTGGCTTGTAGTTCAGTTCACAACGAAAAAAAGTGTCAAACATTTCATAGGTAGAATTTTATCGATTGATGACAAAATACCAGTTGTAAAATTTGTACGAAAGGTAAAACAGTCAAAATCTGAAACAACGTTTAGTTATCCTATTGTAGAAGATATCTGTGTTATTAAATCTGAAGCAGATATAATTTGTGTTTTACCTCAGCCCGTTATTTCTCGACGTGGTCAACTAATTTTTAACGTTGAtctcaataaatataatatccagtaa
Protein Sequence
MPRNYIRKSLRATCYTPEDLAIAIQRVENKELTMYAAAKLYNIPVATLHNRLHKKTGIKSSTLGRPPVLPLEIETQLANGLAVLEKWGFGLSRKEVFSLVREFIHLNGISTPFNSGVPGPDWFTNFRKRHRLSLKKAQPIEHVRRKNTDPFIVGEYFSLLQATLKTLGLEQRPELIWNLDETSVSLDPSKTKVVGRKGAPCSRTTHGTGKEHITVLTSVSAGGQKLTPLIIFKGKYVWDTWMADTRNLELSYAASKRGWMETEIFHNYMEKIFIPGLGEERPVLVVYDGHSTHVDIKVVELARKHNVTILKLPPHTSHLLQPLDVAVFKSFKSSWDAKLVEWQRHNVGVKLPKKVFSNLFAEVWNNTKSETIINGFIKTGICPFNSDVISVDKYDPRSYKRWIEKHKMENVFQPPQPVLQSDVDSPVSLLELSLNVINRWICDDGTIYDIEGPQSSFLVPETFETVHLLVDVAKHEEQASSFLTNHTPQSSFMLPETSQSVHLLVNVTKHEEQASSFVANNQNDLPICLSNIAYKTKPITSAESKIKIISNEVVNYPYSFEDLLLQKVQQSPRTNMKTKKKRVAIGAEVITESLIQNKTNTEIETHRLPRKKVKRNNKDTVLKEINAYNQKKNINGETSETKKQIAKKRADKKDGNQKKKKKTKLTLSTDTESSNSETEFMTVDTDSEYENMDDYLKQCLKIQEDEENIEPDAKLPFGLSDIKFYDESSLQLKKEDWLVVQFTTKKSVKHFIGRILSIDDKIPVVKFVRKVKQSKSETTFSYPIVEDICVIKSEADIICVLPQPVISRRGQLIFNVDLNKYNIQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00374017;
90% Identity
iTF_00172815;
80% Identity
iTF_00374017;