Cmes015458.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Cybosia mesomella
Gene Symbol
clz9
Assembly
GCA_946251875.1
Location
CAMIUH010000440.1:51763-54222[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.9e-07 0.00011 23.8 0.0 1 40 16 55 16 60 0.91

Sequence Information

Coding Sequence
ATGCCTCGTAACTATATAAGGAAATCGTTACGGGCAACTTGTTATACTCCTGAGGACTTAGCGATTGCAATACAGAGAGTGGAGAATAAAGAATTAACCATGTACGCAGCAGCTAAGTTATATAACATACCTATCGCTACGCTGCACAATCGCTTACATAAAAAAACTGGAATAAAAAGCAGTACTCTAGGGCGTCCACCGGTTTTGCCTCTTGAAATAGAAACCCAGTTGGCGAACGGACTTGCAGTATTAGAAAAATGGGGATTTGGATTGTCCAGAAAGGAAGTGTTTTCACTTGTAAGGGAATTCGTTCAATTGAATGGGATATCAACACCATTTAATAGTGGAGTTCCAGGACCAGATTGGtttacaaattttagaaaacgaCATAGATTATCATTAAAAAAGGCTCAACCTATTGAGCATGTCAGACGAAAGAATACAGATCCGTTCATCGTGGGTGAATATTTTAGTCTATTGCAGGCTACTCTAAAGACATTAGGTCTTGAACAAAGGCCAGAACTCATCTGGAACCTTGATGAGACTTCCGTTAGTTTGGATCCCTCTAAAACCAAAGTAGTTGGGCGAAAGGGTGCGCCATGCTCTCGAACAACTCACGGTACAGGCAAAGAACATATAACAGTTCTAACAGCAGTAAGTGCCGGCGGACAGAAACTGACTCCTTTAATCATATTTAAAGGTAAATATGTATGGGACACCTGGATGGCTGACACACGTAATTTACAGTTATCTTACGCAGCTAGTAAAAGAGGATGGATGGAGACAGAAATATTTCACAATTACATGGAAAAAGTATTTATTCCAGGACTCGGCGAAGAAAGGCCAGTTCTGGTAGTCTACGACGGTCATAGCACTCATGTTGATATAAAAGTGGTTGAGTTGGCACGAAAACATAATgtcacaatattaaaattacccCCACATACGTCTCATCTTTTACAGCCACTGGATGTAGCTGTATTTAAATCTTTCAAATCTAGCTGGGATGCCAAGTTAGTTGAATGGCAGCGACATAACGTTGGTGTGAAGCTACCTAAAAAAGTGTTTTCTAACTTATTTGCAGAAGTATGGAATAATACAAAATCTGAAACTATTATCAACGGCTTTATAAAAACAGGAATATGTCCTTTTAATTCAGATGTAATTTCAGTCGATAAGTATGATCCAAGATCTTACAAGCGCTGGATAGAAAAGCATAAAATGGAAAACGTATTTCAGCCTCCACAACCTGTTCTTCAGTCAGATGTTAACTCTCCCGTGTCGTTACTTGAACTTGGCCTTAATGTAATTAATAGATGGATATGTGACGATGGGACAATTTACGACCTTGAAGGTACACAGTCTTCATTTTTGTTTCCTGAAACTTCTGAAACAGTCCACTTGCTGGTAGATGTGGCAAAACATGAAGAGCAGGCGTCATCATTTTTGGCAAGCCATAGCCCACAGTCTTCATTTATGCTTCCTGAAACTTCTCAATCAGTCCACTTGCTGGTAAATGTGACAAAGCATGAAGAGCAGGCGTCATCATTTGTGGCAAACAACCAAAATGATTTACCGATTTGCCTATCTAATTTTCAAACAAAACCCATAACTAGTGCGGAGTCTAAAATTAAGATTATTTCTAATGAAGTAGTTAACTACCCTTACAGTTTTGAAGACCTCTTACTTCAAAAGGTTCAACAAAGTCCACGaactaatatcaaaataaagaagaaaCGGGTGGCAATAGGGGCTGAGGTAATAACGGAGTCTTtgattcaaaataaaactaatactGAGATTGAAACACACAGACTACCAAGGAAGAAagtgaaaagaaataataaagatACAGTACTTAAGGAAATAAATGCGTTTAAtcagaaaaaaaagataagtgGAGAGACAAGTAAGACTAAAAAACAGATAGCTAAGAAAAGAGCTGATAAAAAGGATGGtaaccaaaagaaaaaaaagaaaactaaattaACGTTAAGTACCGACACAGAAAGTTCCAATAGCGAAACAGAGTTTATGACTGTAGATACCGAATCTGAATATGAAAATATGGACGACTACTTAGAACAATGCCTGAAAATCCAAGAAGATGAAGAAAACATTGAACCAGACGCAAAACTGCCTTTTGGCTTAAGCGACATAAAATTTTATGACGAAAGTtcgttacaattaaaaaaagaagactGGCTTGTAGTTCAGTTCACAACGAAAAAAAGTGTCAAACATTTCATAGGTAGAATTGATGATAAAATACCAGTTGTAAAATTTGTACGAAAGGTAAAACAGTCAAAATCTGAAACAACGTTTAGTTATCCTATTGTAGAATATATCTGTGTTATTAAATCTAAAGCAGATATAATTTGTGTTTTACCTCAGCCCGTTATTTCTCGACGCGGTCAACTAATATTTAACGTTGAtctcaataaatataatatccagtaa
Protein Sequence
MPRNYIRKSLRATCYTPEDLAIAIQRVENKELTMYAAAKLYNIPIATLHNRLHKKTGIKSSTLGRPPVLPLEIETQLANGLAVLEKWGFGLSRKEVFSLVREFVQLNGISTPFNSGVPGPDWFTNFRKRHRLSLKKAQPIEHVRRKNTDPFIVGEYFSLLQATLKTLGLEQRPELIWNLDETSVSLDPSKTKVVGRKGAPCSRTTHGTGKEHITVLTAVSAGGQKLTPLIIFKGKYVWDTWMADTRNLQLSYAASKRGWMETEIFHNYMEKVFIPGLGEERPVLVVYDGHSTHVDIKVVELARKHNVTILKLPPHTSHLLQPLDVAVFKSFKSSWDAKLVEWQRHNVGVKLPKKVFSNLFAEVWNNTKSETIINGFIKTGICPFNSDVISVDKYDPRSYKRWIEKHKMENVFQPPQPVLQSDVNSPVSLLELGLNVINRWICDDGTIYDLEGTQSSFLFPETSETVHLLVDVAKHEEQASSFLASHSPQSSFMLPETSQSVHLLVNVTKHEEQASSFVANNQNDLPICLSNFQTKPITSAESKIKIISNEVVNYPYSFEDLLLQKVQQSPRTNIKIKKKRVAIGAEVITESLIQNKTNTEIETHRLPRKKVKRNNKDTVLKEINAFNQKKKISGETSKTKKQIAKKRADKKDGNQKKKKKTKLTLSTDTESSNSETEFMTVDTESEYENMDDYLEQCLKIQEDEENIEPDAKLPFGLSDIKFYDESSLQLKKEDWLVVQFTTKKSVKHFIGRIDDKIPVVKFVRKVKQSKSETTFSYPIVEYICVIKSKADIICVLPQPVISRRGQLIFNVDLNKYNIQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00374017;
90% Identity
iTF_00172815;
80% Identity
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