Basic Information

Insect: Cordilura impudica
Gene Symbol: bab2
Assembly: GCA_963682025.1
Location: OY821519.1:2001781-2008175[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 3.2e-17 6.7e-14 54.1 0.0 1 43 56 99 56 101 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	3.2e-17	6.7e-14	54.1	0.0	1	43	56	99	56	101	0.95

Sequence Information

Coding Sequence: ATGATTGAAAGCGGACATCCTTGGATGGGTGGTGCATCAACCTCATCAGTTACCGACAGCTATCAATATCAATTGCAGTCCATGTGGCAAAAATGTTGGAATACTAATCAGCAAAACCTTGTGCAGCAATTGCGATTTCGTGAGCGCGGACCATTAAAATCATGGCGTCCAGAAGCCATGGCAGAGGCTATTTTTAGCGTACTCAAAGAAGGTTTATCATTGTCACAAGCAGCTAGAAAATATGATATTCCATATCCAACATTTGTTTTGTATGCTAATCGTGTCCATAACATGTTGGGACCTTCGTTAGATGGCGGCTCAGATCCGCGACCGAAGGCAAGAGGACGACCCCAACGAATATTGCTGGGCATGTGGCCGGAAGATTTAATACGTTCCGTTATTAAGGCTGTAGTATTTAGAGATTATCGTGAAATCAAAGATGAAATGGGTGGCCTGCCATTTGCGAACGGTCAACCGCATGCGgCTATATTTGGTACTTCGCCTGGGGGTTCTACGGTTTCTAATGGATTTCACAATGCTGCAAAACTTGCCGCTCAAAATGTTGGTATTGCACAAGAGACTGCAAGTCCTCTTTCTTCTATGACTGAAAACTTACGACGCCAAATTATGTCGCAACAACAACAATCACCCATATCACAATCGATGAACATGTACAAGTCACCATCGTATGGGCAACGCACGGATATCGATGATCAAATATCTGCCGTAAATTCAAAACAACAAGCAGATCGTCGTGGTTCTGAAAATTTGCCAGATCTAAGTGCTTTGGGTTTAATAGGATTACCTGGAATTAATGTTATTCCGACGAGTGGATCACGCAATAATCAAATGCACACAAATTCTGCTGCCTTTTCAAGAGAACGTGAGCGTGAACGAAACCGTGAAAGGGAGAGAGACAGAGAGCGTGAGCGAGAACGAGAACGGGAACGAGAACGTGAGCGCGATTTGAAAGATGCAATGCAGGCCAGACAATACAGCAATCAATCACGTGGTTCTGCTGCAGGTGATATACAAAGGTCAGCTGGTTCAGCTTCTCCTTATCCACAAATGAAGATTAAAGAGCATCCAAACTATGCTTATAACAAACGATTCCTAGAGAGTTTACCACCGGGAATTGATTTTGAGGCCATAGCTAATGGTTTGCTTCAGAAAACGGCCAACAAAAGTCCACGTTTCGAAGACTTTTTCCAGGGTCCAGACATGAACGAGCTAATCTCAAATGCAGAGGCAGCCACCAATCCTCCTTTTCCCAACCAGCGAGAGTCTAATCTCATGAAAATCAAATTAGAACACCAACCCACTGAGATTCAACATGAGGATTGA
Protein Sequence: MIESGHPWMGGASTSSVTDSYQYQLQSMWQKCWNTNQQNLVQQLRFRERGPLKSWRPEAMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSLDGGSDPRPKARGRPQRILLGMWPEDLIRSVIKAVVFRDYREIKDEMGGLPFANGQPHAAIFGTSPGGSTVSNGFHNAAKLAAQNVGIAQETASPLSSMTENLRRQIMSQQQQSPISQSMNMYKSPSYGQRTDIDDQISAVNSKQQADRRGSENLPDLSALGLIGLPGINVIPTSGSRNNQMHTNSAAFSRERERERNRERERDRERERERERERERERDLKDAMQARQYSNQSRGSAAGDIQRSAGSASPYPQMKIKEHPNYAYNKRFLESLPPGIDFEAIANGLLQKTANKSPRFEDFFQGPDMNELISNAEAATNPPFPNQRESNLMKIKLEHQPTEIQHED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01259137; iTF_01373987; iTF_00975521; iTF_01397345; iTF_01174147; iTF_01236579; iTF_00899462; iTF_01237575; iTF_01398408; iTF_00892652; iTF_00655246; iTF_01376558; iTF_00741775; iTF_00760015; iTF_00259696; iTF_00258789; iTF_01165456; iTF_00199793; iTF_00716562; iTF_01109268; iTF_01201524; iTF_01399380; iTF_00350104; iTF_00900505; iTF_01074393; iTF_01176857; iTF_01312936; iTF_01235645; iTF_01137920; iTF_01162181; iTF_01315430; iTF_01313729; iTF_01427398; iTF_00922027; iTF_00997646; iTF_01194318; iTF_01260918; iTF_00435445; iTF_01314584;
90% Identity: iTF_00716562;
80% Identity: -