Slun019892.1
Basic Information
- Insect
- Stomorhina lunata
- Gene Symbol
- bab2
- Assembly
- GCA_933228635.1
- Location
- CAKOFY010003643.1:281782-285125[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.2e-17 3.8e-14 52.6 0.0 1 43 56 99 56 101 0.95
Sequence Information
- Coding Sequence
- ATGATTGAAAGCGGACATCCTTGGATGGGTGGTGCCTCCACTTCTTCGGTAACTGACAGCTATCAATATCAATTGCAGTCCATGTGGCAAAAATGTTGGAATACTAATCAACAAAATCTAGTGCAACAGCTAAGATTTCGTGAGCGCGGACCATTAAAATCATGGCGTCCTGAAGCCATGGCCGAAGCCATATTTAGTGTTTTGAAGGAGGGTTTGTCTTTATCACAGGCTGCCCGTAAATTCGACATCCCCTATCCCACTTTTGTTCTTTATGCCAATCGTGTGCACAATATGCTGGGTCCCTCTTTAGATGGTGGTTCGGATCCTAGACCCAAGGCCAGAGGCAGACCGCAACGTATTTTATTGGGCATGTGGCCGGAAGATTTAATACGTTCGGTTATCAAGGCCGTGGTGTTTAGGGATTATCGTGAGATCAAAGATGAAATGGGTGGTCTACCGTTTGCCAATGGTCAGCCTCATGTGGCAATTTTCGGTTCATCTCCCAGCGGTTCAGGTGTTTCTAACGGTTTCCATAATGCAGCCAAACTGGCAGCTCAGGGCTCTGGAATGGGCCAGGAGTCCACCAGTCCCCTGTCCACCATGACTGAAAATCTAAGGCGTCAGATAATGTCACAGCAGCAACAGTCTCCAATATCACAATCCATGAATATGTACAAGTCTCCCTCGTATGTCCAGCGCTCCGAATTGGAAGAACAAATATCCGGAGTGGGCTCTAAGCAACATGCTGATCGTCGGGGTTCTGAAAATCTACCAGATCTTAGTGCTTTGGGATTAATGGGCTTGCCGGGACTCAATGTTATACCCACAGGAGCTTCGCGTAGCAGTCAAATGCACTCGAGTGCTGCTGGTTTTTCGCGAGAACGAGAGCGTGAAAGAGAGAGGGAAAGAGAAAGAGAACGAGAGCGTGAACGTGAAAGGGAGCGAGATAGAACTCGTGAAAGAGAAAGAGAGCGTGAACGTGAAAGAGAACGCGAACGTGAAAGACAATATAGCAATCAATCTAGAAGTTCGGCTGCAGGAGAATCACAAAAGTCGGGCGGTTCAGCCTCACCCTATTCACAAATGAAAATGAAAGAACATCCCAATTATGCCTACAATAAGCGCTTTTTGGACAGCTTACCACCCGGCATTGATTTCGAGGCCATAGCCAATGGTTTACTGCAAAAATCCACCAACAAAAGTCCGCGTTTTGAAGATTTTTTCCAGGGTCAGGATATGAATGATCTAATGGCGGGACCAGAAACGGCCAGCTCGGGTCATTTTCCAGCGCGTAGAGAAACTGATCTTATGAAAATCAAATTGGAACATCAACCCACAGAGCTGCAGCATGAGGATTGA
- Protein Sequence
- MIESGHPWMGGASTSSVTDSYQYQLQSMWQKCWNTNQQNLVQQLRFRERGPLKSWRPEAMAEAIFSVLKEGLSLSQAARKFDIPYPTFVLYANRVHNMLGPSLDGGSDPRPKARGRPQRILLGMWPEDLIRSVIKAVVFRDYREIKDEMGGLPFANGQPHVAIFGSSPSGSGVSNGFHNAAKLAAQGSGMGQESTSPLSTMTENLRRQIMSQQQQSPISQSMNMYKSPSYVQRSELEEQISGVGSKQHADRRGSENLPDLSALGLMGLPGLNVIPTGASRSSQMHSSAAGFSRERERERERERERERERERERERDRTRERERERERERERERERQYSNQSRSSAAGESQKSGGSASPYSQMKMKEHPNYAYNKRFLDSLPPGIDFEAIANGLLQKSTNKSPRFEDFFQGQDMNDLMAGPETASSGHFPARRETDLMKIKLEHQPTELQHED
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00370896;
- 90% Identity
- iTF_01259137; iTF_01236579; iTF_01194318; iTF_01260918; iTF_01235645; iTF_01237575; iTF_00922027; iTF_00259696; iTF_00258789; iTF_00350104; iTF_01176857;
- 80% Identity
- -