Cbeh010243.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Colias behrii
Gene Symbol
-
Assembly
GCA_029959075.1
Location
JARWMB010000009.1:628308-630581[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.4e-09 7.8e-07 29.6 0.2 2 44 15 57 14 58 0.93

Sequence Information

Coding Sequence
ATGGCACGCTATAAAGCTAGAGGGATTCGAGGTAATTGGTCAGAAGCATCAATGAAACAAGCTTTAACTGCAGTCAAAATCGGTAAGATGAAAGTAAATACGGCTGCAAAGCATTATAATTTGCCAAGACGTACTCTAAGGCGTTATTTACAAGAGAAAAAGGAGACAAAATCTACTCTGGGTCGGAAACCACTTCTTGACCCTGAACAAGAGAAGATTTTAGCATCCCGTGTTATTCGCCTGTGCAATGTGGGATACCCATTGACACAACGTGTACTACGTAGATGCGTAAAGACATTCTGTGATCGAAATAACATTTCCGCGTCAGGTGGAGACTTGATGGTAGGACGAGATTGGCTGAGAGGATTTTTAAAACGTCATAGGAATATCAGCAGACGAAAGGCCCAAAACCTAAATCCCGCAAGGGCGCAAAAGTTAAATAAAGCAGTCGTTTCTGATTATTTtgctaaattaaaaaaagtctTGGAAGATAATGACATCATGAATAAACCAGAACGCATTTTCAATATTGACGAAAAGGGTTGCCAACTTAATTTGCACAAATCACCAGAAGTTTTGGCTGAACGTGGATCCAAGAGAGTACATTTAGTAGCACCAGAACATGGCGAGAATGTCACAATAGTTTCATGTGGCAATGCCTTGGGCCATGCGATTCCGCCCATGATTCTCTTCAAAGGCAAACGCATGAAGCCAGAATGGATAGATTCCTTGCCAACCAGTTCAATAGCCCAAATGACACCCAAAGGGAGCATGAACTCTGAAACTTTTGTAAACTGGATTCATCATTTTTCGAAATTTAAATTGCCGGGACCTTGTTTACTTATCTTCGATGGAGCCAAATGCCATTTGGACTATTCGATTGTTGAAGCAGcagaaaaatttgacatcaagCTTTTCTGCCTTCCTAGTAACACCACTCATGAATTACAGCCGATGGACAAATCGGTATTTCGATCCTTTGAGTATTACTGGGACGAGGAAGTTTTAAAGTACTGGTCAGTACACGAAGACaggaaaataacaaaacaaCGATTTGGGATATTATTTTCTAAAGCGTGGGACAAATCTGCGACACCTGCTAATATCAAATCTGGATTTGAAGCGACCGGAATTTTCCCATTTAATCCAGAAAGGATACCAGAAGAGGCATACGCTCCCAGCATACCTACCTTTGATTCCTCAATACCTGGACCTTCTCAAAATCAAGAAAATAATGACCCCAATGATAGCGACGCTACTAATGCTAGTGAAAATCTTTTGATTCCTCCTCAAGGAAATGAAGATCCTATCGACAGCGACGCTACTAATGCTAGTGAAAATCTGTTAATTCCTCCTCAAGGAAATGAAGATCCTATTGACAGTGATGCTACTAATGCTAGCGAAAATCTCGTCATTCCTGCTCAAGTAAATGAAGATCCCAATGACAGCGCCGCTATTGATGTCAGTGGAAATCAGGTTATTCCTCTTCATTCTCTTCCAAATGACGAAAAACATAATTCAACTCCACCTACGCAGTCTCTTGCTCGAACTGATTCCTCTGTTGAAAACCCGGTGCCTATACTGCATTCAGATCAAAAAGATTCCCAGACAAGTGAACACCTATTGCCAAATACTGCAAATCGTTCTGATAATAATCCACAGAGCCCAACTCAAGTAGATAGATCGACTTTTATAGAACCTCAGCCAAATATATATGACGATATCGATAGTAGCGACGAGATTCCTTTATCCAAACTAAAGCAGTACAAGAATAATAGAGACTCGATAACTGAATCAAAAGTCTGCTCCACAACACTTAATGAGTCATATTCATCTTTTTGTGAAATTTTAAAAACCCCGGAGAAAACTTCAAGTCCAAAAACTACACCTAGAGCAAAAGCTATTAATAGTCTGGCACAGGAGCTAACAAAATCAATGTTTACGGAGAAAATTAATAAGCCAGGACCATCCAACGCTagcaaacaaaaaattaaaaataagccAGGGTCATCTACAGTTTCTTTCCAAAAAAGGAAACAATATTCTGCTAAAATGAAGAAGACTGAAGCAGTCACATCTAAGGTTTCTAAACAGGAAGGTAAAGGACGTTCTAAAAAATCTAAAAACTCTTGGTACTGTTACGTTTGCGATGAGGATAAAATAGCAGACATGAGACTATGCTTTCGATGTCAAACGTACGTCCATGAGGACTGTGTTGGCTTAACAAAAGAAGACACAGATGAATTTGTTTGCACTCGGTGCAGTCAGGACTAA
Protein Sequence
MARYKARGIRGNWSEASMKQALTAVKIGKMKVNTAAKHYNLPRRTLRRYLQEKKETKSTLGRKPLLDPEQEKILASRVIRLCNVGYPLTQRVLRRCVKTFCDRNNISASGGDLMVGRDWLRGFLKRHRNISRRKAQNLNPARAQKLNKAVVSDYFAKLKKVLEDNDIMNKPERIFNIDEKGCQLNLHKSPEVLAERGSKRVHLVAPEHGENVTIVSCGNALGHAIPPMILFKGKRMKPEWIDSLPTSSIAQMTPKGSMNSETFVNWIHHFSKFKLPGPCLLIFDGAKCHLDYSIVEAAEKFDIKLFCLPSNTTHELQPMDKSVFRSFEYYWDEEVLKYWSVHEDRKITKQRFGILFSKAWDKSATPANIKSGFEATGIFPFNPERIPEEAYAPSIPTFDSSIPGPSQNQENNDPNDSDATNASENLLIPPQGNEDPIDSDATNASENLLIPPQGNEDPIDSDATNASENLVIPAQVNEDPNDSAAIDVSGNQVIPLHSLPNDEKHNSTPPTQSLARTDSSVENPVPILHSDQKDSQTSEHLLPNTANRSDNNPQSPTQVDRSTFIEPQPNIYDDIDSSDEIPLSKLKQYKNNRDSITESKVCSTTLNESYSSFCEILKTPEKTSSPKTTPRAKAINSLAQELTKSMFTEKINKPGPSNASKQKIKNKPGSSTVSFQKRKQYSAKMKKTEAVTSKVSKQEGKGRSKKSKNSWYCYVCDEDKIADMRLCFRCQTYVHEDCVGLTKEDTDEFVCTRCSQD