Hsal033642.1
Basic Information
- Insect
- Hedya salicella
- Gene Symbol
- -
- Assembly
- GCA_905404275.1
- Location
- FR990111.1:19211966-19214131[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-09 2.2e-06 28.6 0.1 3 43 16 56 14 58 0.91 2 2 4.1 6.7e+03 -1.7 0.0 18 28 293 303 293 303 0.90
Sequence Information
- Coding Sequence
- ATGGCACGCTATAAAACTAAAGGGCTTCGTGGTAATTGGCCAGAAGCATCAATGAAACTAGCTTTAACTGCAGTCAAAAGCGGTAAGATGAAAGTATATACGGCTGCAAACCATTATAAGGTGCCAAGACGCACTCTAAGGCGTTATTTACAAGAGGAAAAAGAGACTAAATCTACTTTGGGTCGGAAACCACTTCTTAACCCTGAACAAGAGAAGGTTTTGGCATCCCGTGTTATTCGCCTGTGTAATGTGGGATACCCATTGACACAGCGTGTACTACGTAGATGCGTAAAGACATTCTGTGATCGAAATAACATTTCAGCGTCAGGTGGAGACTTAATGGTGGGACGAGATTGGCTGAGGGGATTTTTAAAACGTCATAGGAATATCAGTAGACGAAAGGCACAAAACCTAAATCCCGCAAGGGCACAAAAGTTGAATAAAGCAGTCGTTTCTGATTATTTTGCTAAGTTAAAGAAAGTCTTGGAAGGTAATGATATTATGAATAAACCGGAACGCATTTTTAATATCGACGAAAAGGGTTGCCAGCTGAATTTGCACAAATCCCCAGAAGTTTTGGCTGAACGTGGATCCAAGAGAGTACATTTAGTAGCACCAGAACACGGGGAGAATGTCACAATAGTATCATGTGGCAATGCCTTGGGCCATGCTATTCCGCCCATGATTCTGTTTAAAGGCAAACGCATGAAGCCAGAATGGGTAGATTCCTTACCAACCAGCTCAGTAGCCCAAATGACACCCAAAGGGAGTATGAACTCTGACAAGTTTGTGAACTGGATTCaccatttttcaaaattcaaattgcCAGGACCTTGTTTACTTATCTTCGATGGAGCCAAATGCCACTTAGTCTATTCGATTGTTGAAGCAGCAGAAAAATTCGACATCAAGCTTTTTTGCCTTCCTAGTAACACCACACATGAATTACAGCCGATGGATAAATCGGTATTTCGATCCTTTGAATATTACTGGGACGAGGAAGTCTTAAAGTACTGGTCAGTACATGAAGACAGGAAAATAACGAAACAAAGGTTTGGGATATTATTTTCCAAAGCGTGGGACAAAGCTGCGACACCTGCTAATATTAAATCTGGATTTGAAGCGACCGGAATTTTCCCATTTAATCCAGCAAGGATACCAGAAGAGGCATACGCTCCCAGCATACCTACCTTTAATCCCACAATACCTGGACCTTCTGAAAATCAAGAAAATAATGATCCCATGGACAGCGACGCCACTAATGCTAGCGAAAACCTGTTATATCCTCCTCAAGTTAATGAAGATCCAATTGATAGCGACGCTATTGATGTCAGTGGAAATCAGGTTACTCCTTCTCATGTTCTTCCAAATAACGACGAACATAATTCAACTCCACCTACGCAGTCTCTTGCTCGAACTGATACCTCTGTTGAAAATCCGGTGCCTATACTGAATCCAAATCAAAAAGATTCCCAGACAAGTGAACATCTATTGCCAAATACTGCAAATCGTTCTGCTGCAATTCCAGACAACGCTTCTGATAATAATCCACAGCACCCAACTCAAGTAGATAGATCGAACTTTATAGAACCCCAGCCAAGTTCCTATGACGATTTCGATAGTAGCGACGAGATTCCTTTATCCAAACTAAAGGAGCACAAGAATAATAGAGATTCGAAAACTGAATCAAAAGTCTGCTCCACAACACTTAATGAGTCATACTCATCTTTTtgtgaaattttaaaaaccccggAGAAAACGTCATGCCCAAAACCTACACCTAGAGCAAAAGCTATTAATAGTCTGGCACAAGAGCTAactaaatcaatgtttacagagaaaaataaaaagccaGGACCATCCAATGcttgtaaacaaaaaatgaaaaatattccaGGTCCATCTAGAGTTTCTCCTCAAAAAAGGAAGCAATATTCTGCTAAAATGAACAAGACTGAAGAAGTAACTTCTAAGGTTTCTAAGCAAAAAGGTAAAGGACAttctaaaaaatctaaaaacagaTGGTATTGTTACATTTGCGATGAGGATAGAATAGCAGATATGAGACTATGCTTTTTATGTAAAATCTACGTCCATGAAGACTGTGTTGGGTTAACAAAAGAAGACACTGATAAATTTGTTTGCACTCGGTGCAGTCAGGACTAA
- Protein Sequence
- MARYKTKGLRGNWPEASMKLALTAVKSGKMKVYTAANHYKVPRRTLRRYLQEEKETKSTLGRKPLLNPEQEKVLASRVIRLCNVGYPLTQRVLRRCVKTFCDRNNISASGGDLMVGRDWLRGFLKRHRNISRRKAQNLNPARAQKLNKAVVSDYFAKLKKVLEGNDIMNKPERIFNIDEKGCQLNLHKSPEVLAERGSKRVHLVAPEHGENVTIVSCGNALGHAIPPMILFKGKRMKPEWVDSLPTSSVAQMTPKGSMNSDKFVNWIHHFSKFKLPGPCLLIFDGAKCHLVYSIVEAAEKFDIKLFCLPSNTTHELQPMDKSVFRSFEYYWDEEVLKYWSVHEDRKITKQRFGILFSKAWDKAATPANIKSGFEATGIFPFNPARIPEEAYAPSIPTFNPTIPGPSENQENNDPMDSDATNASENLLYPPQVNEDPIDSDAIDVSGNQVTPSHVLPNNDEHNSTPPTQSLARTDTSVENPVPILNPNQKDSQTSEHLLPNTANRSAAIPDNASDNNPQHPTQVDRSNFIEPQPSSYDDFDSSDEIPLSKLKEHKNNRDSKTESKVCSTTLNESYSSFCEILKTPEKTSCPKPTPRAKAINSLAQELTKSMFTEKNKKPGPSNACKQKMKNIPGPSRVSPQKRKQYSAKMNKTEEVTSKVSKQKGKGHSKKSKNRWYCYICDEDRIADMRLCFLCKIYVHEDCVGLTKEDTDKFVCTRCSQD*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00357387;
- 90% Identity
- iTF_00364845;
- 80% Identity
- -