Xsex014367.1
Basic Information
- Insect
- Xestia sexstrigata
- Gene Symbol
- -
- Assembly
- GCA_941918865.2
- Location
- CALNXB020000236.1:622991-625351[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-10 1.1e-07 32.0 0.3 1 44 14 57 14 58 0.94 2 2 6.4 4.1e+03 -1.9 0.0 18 28 293 303 293 303 0.89
Sequence Information
- Coding Sequence
- atggcacgctataaagctaaagggcttcgaggtaattggtctgaagaatcaataaaactagctataactgcagtcaaaagcggtaggatgaaagtatatacggctgcaaagcattataatgtgccaagacgcactctaaggcgttatttacaagagaaaaaggagactaaatccactttgggccggaaaccacttcttaaccctgaacaagagaagattttggtatcccgtgttattcgcctgtgcaatgtgggctacccattgacacaccgtgtactacgtagatgcgtaaagacattctgtgatggaaataacatttcagcgtcaggtggagatttgatggtgggacgagattggctgagaggatttttaaaacgtcataggaatataagcagacgaaaggcacaaaatctaaatcccgcaagggcgcaaaaattgaataaagcagtcgtttctgattattttggtaaattaaagaaagtcttggaagacaataacattatgaataaaccggaacgcatttttaatattgacgaaaagggatgccagcttaatttgcacaaatcaccagaagttttagctgaacgtggatccaagagagtgcatttagtggcaccagaacatggcgagaatgtcacaatagtttcatgtggcaatgccttgggtcatgcgattccgcccatgattctctttaaaggcaaacgcatgaagccagaatgggtagattcattaccaactagctcaatagctcaaatgacacccaaagggagtatgaattctgaaacgtttgtaaactggattcaccatttttcgaaatttaaattgccaggaccttgtttacttatcttcgatggagccaaatgccacttggactattcgattgttgaagcagcagaaaaattcgacatcaagcttttctgccttcctagtaacaccacacatgaattacagccgatggacaaatccgtatttcgatcctttgaatattactgggacgaggaagtcttaaagtactggTCAGTACACGAAGACAGGAAAATAACAAAACAAAGATTTGGGTTATTATTTTCCAAAGCGTGGGACAAAGCTGCGACACCTGCTAATATCAAATCTGGATTTGAAGCGACCGGAATTTTCCCATTTAATCCAGCAAGGATACCAGAAGAGGCATACGCTCCCAGCATACCTACTTATAATCCCACAATACCTGGACCTTCTGAAAATCAAGAAAATAATGACCCCAATGACAGCGACGCTACTAATGCTAGCGAAAGTCTGTTAAATCCTCCTCAAGGAAATGAAGATCCCATTGACAGCGACGACGCGAATGCTAGCGAAAATCTGGTCATTTCTCCTCAAGAAAATGAAGATCCCAACGACAGAGACGATACTAATGCTAGCGAAAATCTGATCATTCCTCCTCAAGAAAATGAAGATCCCATTGACAGCGACGCTACTAATGCTAGCGAAAATCTGGTCATTCCTGCTCAAGTAAATGAAGATCCCAATGACAGCGCCGCTATTGATGTCAGTGGAACTCAGGTTATTCCTCCTCATCCTCTTCCAAATAACGACGAACATAATTCAACTCCACTTAGGCAGTCTCTCGCTCGAACTGATACCTCTGTTGAAAATCAGGTGTCTATACTGCATCCAGATCAAAAAGATTCCCAGACAAGTGAACATCTATTGGCAAATACTGCATTTAATAGTTGTGCTGCCATTTTAGACAACGCTTCTGATAATAATTCACAGCATCCAACTCAAGTAGGTAGAACGAACTTTATAGAACCCCAGCCTATCGTCTATGACGATTTCGATAGTAGCGACGAGGTTCCCATAACAAAACTAAAACAGCACAAGAATAATAGAGACTCGAAAACTGAATCaaaagtctgctccacaacacttaatgagtcatattcatctttttgtgaaattttaaaaaccccggagaaaacgtcaagtccaaaaactaaacctagagcaaaagctattaatagtctagcacaggagctaacaaaatcaatgtttacagagaaaaataataagccaggaccatccaatgcttgtaaacaaaaaaatatgccaggtccatctagagtttcttcccaaaaaaggcaacaatattctgctaaaatgaacaagactgaagcagtaacttctaaggattctaaacaaaaaggtaaaggacattctaaaaaatctaaagactgttggtattgttacatttgcgatgaggatagaatagcagacatgagactatgctttttatgtaaaacgtacgtccatgaagactgtgttgggttaacaaaagaagacactgataaatttgtttgcactcgATGCAGTCAGGACTAA
- Protein Sequence
- MARYKAKGLRGNWSEESIKLAITAVKSGRMKVYTAAKHYNVPRRTLRRYLQEKKETKSTLGRKPLLNPEQEKILVSRVIRLCNVGYPLTHRVLRRCVKTFCDGNNISASGGDLMVGRDWLRGFLKRHRNISRRKAQNLNPARAQKLNKAVVSDYFGKLKKVLEDNNIMNKPERIFNIDEKGCQLNLHKSPEVLAERGSKRVHLVAPEHGENVTIVSCGNALGHAIPPMILFKGKRMKPEWVDSLPTSSIAQMTPKGSMNSETFVNWIHHFSKFKLPGPCLLIFDGAKCHLDYSIVEAAEKFDIKLFCLPSNTTHELQPMDKSVFRSFEYYWDEEVLKYWSVHEDRKITKQRFGLLFSKAWDKAATPANIKSGFEATGIFPFNPARIPEEAYAPSIPTYNPTIPGPSENQENNDPNDSDATNASESLLNPPQGNEDPIDSDDANASENLVISPQENEDPNDRDDTNASENLIIPPQENEDPIDSDATNASENLVIPAQVNEDPNDSAAIDVSGTQVIPPHPLPNNDEHNSTPLRQSLARTDTSVENQVSILHPDQKDSQTSEHLLANTAFNSCAAILDNASDNNSQHPTQVGRTNFIEPQPIVYDDFDSSDEVPITKLKQHKNNRDSKTESKVCSTTLNESYSSFCEILKTPEKTSSPKTKPRAKAINSLAQELTKSMFTEKNNKPGPSNACKQKNMPGPSRVSSQKRQQYSAKMNKTEAVTSKDSKQKGKGHSKKSKDCWYCYICDEDRIADMRLCFLCKTYVHEDCVGLTKEDTDKFVCTRCSQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00357387;
- 90% Identity
- -
- 80% Identity
- -