Cdum019575.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Clepsis dumicolana
Gene Symbol
sip1
Assembly
GCA_963691665.1
Location
OY829523.1:2997072-3007076[+]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.3e-57 2e-53 182.5 3.5 8 275 371 620 364 620 0.96

Sequence Information

Coding Sequence
ATGTCTGACGATGAAGTAATACGCTTCGAGATTACTGACCATGACTTGGACAACGAGTTTAACATAAATAGACGAGGGAGAGCCAAGAAAGAACAACAGATTTACGGTGTTTGGGCTAAAGATAGTGACGAGGATGATAATGAAGACAATGTACGGCAAAGAAGCCGTAAACAGAAGGACTATGCAGCCCCCATTGGGTTTGTGGCCGGCGGTGTGCAGCAGGCGGGGAAGAAGAAGGAACCCAAACAAGAAGTGGAGCCAgtggcatcatcatcatcccgaGTGACCATAGCAGACAGCTCTGATGAAGAACATTCAACAGTCCCAGATGAGTCTGAGACTGCAGGCATCAGACGGCAAGGCCAGGGCATGCGGCCAGCAAACCTCGGAGGCAATTTGGGCAACTGGGAAAAACATACTAAGGGTATAGGCGCGAAATTACTTTTGCAGATGGGATATCAACCAGGGAGAGGCTTAGGCAAAGACCTGCAAGGCATATCGGCGCCAGTTGAGGCAACAGTGAGGAAAGGCAGAGGTGCTATTGGTGCCTATGGTCCGGAAAAAGCAGCGTTGAAAGCGAAAAAAGAAGAGGAGCGGCGTCTGAAAGAGAAGCAAGATGATGAGAAAGGCCCAGAGAAATCCTACCACTGGAAGAAATCGCACAAAGGCCGGTATTTCTACCGCGACTCCGCCGACGTCATACAAGAGGGTAAACCTACCATGCACACTATCAGCAGTTCGGAGCTGTCTCGCGTGCCGGTCATAGATATGACTGGCAAAGAGAAGCGCGTGTTGAGCGGCTACCACGCgctgcgcgccgccgcgccgcgcttcGAGCACGAGCCGCGCCGGCGCTGCACTAACTTCGAGGCGCCGCAGTTGCTGCACAATTTGGAGGTTATGGTCGAGTGCTGCGAACAGGATATAATCCAAAACGCCCGCGAGCTCCAGCAAGCCGAGGACGAGATCGTGGTGCTAGAGCGAGACATCCGAGAGTGCGACGAGAAGCTCGCCGCACAACACGTGGCCATCGAAAAAGCCAGGGACATCATGGCGCGGGTCGCGAGGCTGAGCCGGCCGGACCTCTCGCTCGAAACTGCTTATGAGGTCGTGGCTGATTTGAAGGACGCCCACCCCCAAGAATACGACATCTTTGGCATCGGCGCCATAGCCGGCAACATAGTGAGCCCGCTGTTCAGCGCGTGGACGGCGGCGTGGGAGCCGCTCGTGGCGCCCGCGGAGCCCGTGCCGGCGTTCCTCAAGTGGCGCGAGCTGCTGAGTGAGGAGGCCTACAACAGCCTGCTGTGGCAGCACGTCGCGCCCAAGCTCAAGACCGCCGCCGGTGTATGGAACCCCCGAGTTCCGGAGCCGATGCTAGCAGTAGTGTCGGCGTGGGCGCCGGCGTGGCCGCCGTGGCTGGCGCAGGCGCTGCTGTCCAACGTGGTGGCGCCGCGGCTGCTGGAGGCGGTGCGGGGCTGGGACCCCACGGGCGACACGCAGCCGCTGCACCACTGGGTGCTGCCCTGGCACCCGCTGGCAGGCGCGGCGCTGGGCGTGTCGGTGTACCCGCTGATCCGCTcgcggctggcggcggcgctggcggcgtggCACCCGGCGGACGGCTCGGCGCGGCCGCTGCTGGGCGCGTGGCGCGACGCCTGGGGCGCGGCGCTGCCCGCGCTGCTGCAGCAGCACGTCGTGCCCAAGCTGGAGCACTGCCTGCAGACCGCGCCTGTGCACCTCGTGGGCCGCGAGAACACGGCGTGGGGCTGGTGCGCGGAGTGGCTGGAGCTGTTGGGCGCGCCGACGCTGGCGGCcatagcggcgcgcgcgctgctgccGCGCTGGCTGGCCGCGCTGGCCGCCTGGCTCAACACGCAGCCGCAGCACCGCGCCGTGCTCACCAGCTACACGCAGTTCAAGAAAATGTTCCCCGAAGACGTCTTAAAAGAGCCGGCCGTCCGCGATGCCTTCAGGAAGGCCCTCGACATGATGAACCGCAGCGCCGACATCGATGCCGTGGAGCCCCCGCCCCCCCCCCGCTTCACCCTCCCCATCGAAAAGAAAGAGACGTCCAAAATCGCAGACGTTCTCGCTTCTGCGACGCAGCAGAAATCCTTCTCGGAATTGCTGGAGTCTAGGTGCATTGAGAGAGGAATTACGTTTGTACCCATAGCGGGTAAGACGAGAGAGGGTAGGCCTCTGTATAAGATCGGGGCGGATATGCAATGCTACGTTATAAGGAATGTTATTATGTATTCGCATGATAGCGGGAGGACGTTCGAGCCTGTTGGGCTGGACAGGCTGTTAGGGATGGCGGAGGAATAG
Protein Sequence
MSDDEVIRFEITDHDLDNEFNINRRGRAKKEQQIYGVWAKDSDEDDNEDNVRQRSRKQKDYAAPIGFVAGGVQQAGKKKEPKQEVEPVASSSSRVTIADSSDEEHSTVPDESETAGIRRQGQGMRPANLGGNLGNWEKHTKGIGAKLLLQMGYQPGRGLGKDLQGISAPVEATVRKGRGAIGAYGPEKAALKAKKEEERRLKEKQDDEKGPEKSYHWKKSHKGRYFYRDSADVIQEGKPTMHTISSSELSRVPVIDMTGKEKRVLSGYHALRAAAPRFEHEPRRRCTNFEAPQLLHNLEVMVECCEQDIIQNARELQQAEDEIVVLERDIRECDEKLAAQHVAIEKARDIMARVARLSRPDLSLETAYEVVADLKDAHPQEYDIFGIGAIAGNIVSPLFSAWTAAWEPLVAPAEPVPAFLKWRELLSEEAYNSLLWQHVAPKLKTAAGVWNPRVPEPMLAVVSAWAPAWPPWLAQALLSNVVAPRLLEAVRGWDPTGDTQPLHHWVLPWHPLAGAALGVSVYPLIRSRLAAALAAWHPADGSARPLLGAWRDAWGAALPALLQQHVVPKLEHCLQTAPVHLVGRENTAWGWCAEWLELLGAPTLAAIAARALLPRWLAALAAWLNTQPQHRAVLTSYTQFKKMFPEDVLKEPAVRDAFRKALDMMNRSADIDAVEPPPPPRFTLPIEKKETSKIADVLASATQQKSFSELLESRCIERGITFVPIAGKTREGRPLYKIGADMQCYVIRNVIMYSHDSGRTFEPVGLDRLLGMAEE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00462405; iTF_01463269; iTF_00155312; iTF_00156256; iTF_00658415; iTF_01464175; iTF_00009042; iTF_00411476; iTF_00410296; iTF_00412522; iTF_00409296; iTF_00654301; iTF_00656158; iTF_01135769; iTF_00021338; iTF_01245951;
90% Identity
iTF_00155312;
80% Identity
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