Ahol031544.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Acleris holmiana
Gene Symbol
sip1
Assembly
GCA_949316455.1
Location
OX438781.1:4309082-4329213[+]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.9e-49 1.1e-44 154.4 0.1 9 275 369 629 361 629 0.92

Sequence Information

Coding Sequence
atgtcagaCGACGAGGTGATACGCTTCGAAATAACTGACAATGACTTGGACAACGAGTTCAATCCGAACAGACGAGGGAAGGCCAATAAAGAGCAGCAGATTTATGGTGTGTGGGCGAAAGATAGTGATGATGAAGACAATGAAAACAACATCCGCCAGAGGAGTCGCAAGCAGAAGGACTACGCTGCTCCCATTGGCTTTGTGGCGGGCGGGGTGCAACAGGCAGGGAAAAAGAAGGACCCTAAACAAGAGATTCAACCAGCTGAGCCATTATCGCGCATGGTTATTGCAGACAGTTCTGATGAAGAACCGACAGTTCCTGATGAATCTGAAACAGCTGGCATCAGACGGCAGGGCCAGGGCATGCGGTCAGCCAACTTAGGAGGGAACATGGGTAATTGGGAGAAGCATACCAAGGGTATAGGGGCAAAACTGCTATTACAGATGGGATACCAACCAGGCCGAGGGTTGGGCAAGGAATTGCAGGGCATATCAGCACCTGTGGAAGCCACGGTCAGGAAGGGCAGGGGTGCTATCGGAGCTTACGGACCGGAGAAGGCAGCTCTCAAAGCAAAAAAAGAGGAAGAACGTCGCCttaaagaaaaagaagacgAGAAGGCCCCAGAGAAGTCTTACCACTGGAAGAAATCGCACAAAGGCCGCTACTTCTACCGGGATTCCGCTGACGTCATACAAGAGGGTAAACCTTCCATGCACACTATAAGCAGTAGCGAATTATCTCGCGTGCCGGTGATCGACATGACGGGGCGCGAGAAGCGCGTCCTCAGCGGGTACCACGCGCTGCGCGCGGCCGCGCCCCGGTTCGAGCACGAGCCGCGGAGGAAGTGCACGAACTTCTCCGCCCCGCAGCTCGTCCACAACCTGGAGCTCATGGTCGAGTGCTGCGAGCAGGACATAATCCAAAACGCGCGCGAGCTCCAACAAGCCGAGGACGAGTTGGTCGTGCTGGAGCGAGACCTCAACGAGTGCGACTCGAAGATCGCGGAGCAGGATGACGTCATCGAGAAGGTCAAGGACATCAAGGAGAGGGTGGCCAGGCTCAGCCAGCCGGACCTGTCGCTCGAGATGGCTTACGAAGTGGTCGCGGATCTGAAGGAGAGCCACCCGTTAGAGTACGAGGTGTTCGGCATCGGAACCATAGCGGGCAACATCGTGAGCCCGCTGTTCAGCGCGCTGCTGGCCGCGTGGGACCCGCTGAGCGCGCCCGCCGAGCCGGTGCCCGTGTTCAGTCGCTGGCGCGCGCTGCTCAGCGAGGAGGCCTACAACAGCCTGCTGTGGCAGCACTACGCGCCCAAGCTGAAGGCTGCTGCCGCTGACAGTGCAGATGTTGACGTGGAAGAGTGTGTCGGCAGCGTTTGGAACCCGCGCGTGCCGGAGCCGATGCTGCGCGCGGCGGcgggggcggcggcggcgccggcgtgGCTGGCGGGCGcgctggcggcggcggcggtggcgCCGCGCCTGCTGGCGGCCGCGCGCGACTGGGACCCCACGGGCGACACGCAGCCGCTGCACCAGTGGGTGCTGCCCTGGCATCCCATATGCGGCACAGCGTTGTCCAGCTCGGTGTACCCGCTGATCCGGTCGCGGCTGGCGGCGGCGCTGGCGGCGTGGCACCCGGCGGACGGCTCGGCGCGGCCGCTGCTGGGCGCCTGGCGGGCCGCGTGGGGCGCCGCGCTCACCGCCATGCTGCACCAGCACATCGTGCCCAAGCTGGAGCACTGCCTGCAGGCCGCGCCCGTGCACCTCGTCGGACAGGAGAACACGGCGTGGCTGTGGTGCACGGACTGGCTGGAGCTGCTGGGCGCGCCGACGCTGGCGGCCatcgcggcgcgcgcgctgctgcCGCGCTGGCTCGCCGCGCTCGCCGCCTGGCTCAACGCGCAGCCCGAGCACCGCGCCGTGCTCAACAGCTACACGCAATTCAAGAAAATGTTCCCCGAAGAGGTACTCCGCGAGCCAGGCGTCCGCGACGCCTTCCGCAAAGCCCTGGACATGATGAACCGCAGCGCCGACCTGCAGGGCGTggagccgccgccgccgccgcgcctggCGCCCGAGCCGCGCAGGGAGCCCTCGCACCTCGCCGACGCGCTCGCCTCCGCCTGCCACCACAACTCCTTCTCCGAGCTGCTCGAGTCCAGGTGCGTCGAACGCGGGATTACCTTCGTCCCGCTAGCCGGCAAGACGAGAGAAGGAAGACCGCTCTACAGAATTGGAAGCGACATGCAGTGCTATGTTATTAGGAATGTCATCATGTTCTCCAGAGATAATGGGCGGACGTTCGAGCCTATCGGGTTGGATAGGTTGCTGGGAATGGCCGAGGAATGA
Protein Sequence
MSDDEVIRFEITDNDLDNEFNPNRRGKANKEQQIYGVWAKDSDDEDNENNIRQRSRKQKDYAAPIGFVAGGVQQAGKKKDPKQEIQPAEPLSRMVIADSSDEEPTVPDESETAGIRRQGQGMRSANLGGNMGNWEKHTKGIGAKLLLQMGYQPGRGLGKELQGISAPVEATVRKGRGAIGAYGPEKAALKAKKEEERRLKEKEDEKAPEKSYHWKKSHKGRYFYRDSADVIQEGKPSMHTISSSELSRVPVIDMTGREKRVLSGYHALRAAAPRFEHEPRRKCTNFSAPQLVHNLELMVECCEQDIIQNARELQQAEDELVVLERDLNECDSKIAEQDDVIEKVKDIKERVARLSQPDLSLEMAYEVVADLKESHPLEYEVFGIGTIAGNIVSPLFSALLAAWDPLSAPAEPVPVFSRWRALLSEEAYNSLLWQHYAPKLKAAAADSADVDVEECVGSVWNPRVPEPMLRAAAGAAAAPAWLAGALAAAAVAPRLLAAARDWDPTGDTQPLHQWVLPWHPICGTALSSSVYPLIRSRLAAALAAWHPADGSARPLLGAWRAAWGAALTAMLHQHIVPKLEHCLQAAPVHLVGQENTAWLWCTDWLELLGAPTLAAIAARALLPRWLAALAAWLNAQPEHRAVLNSYTQFKKMFPEEVLREPGVRDAFRKALDMMNRSADLQGVEPPPPPRLAPEPRREPSHLADALASACHHNSFSELLESRCVERGITFVPLAGKTREGRPLYRIGSDMQCYVIRNVIMFSRDNGRTFEPIGLDRLLGMAEE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00342214;
90% Identity
iTF_01464175;
80% Identity
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