Cbil012774.1
Basic Information
- Insect
- Clanis bilineata
- Gene Symbol
- MBD-R2
- Assembly
- GCA_036417725.1
- Location
- CM071151.1:15367917-15384432[+]
Transcription Factor Domain
- TF Family
- MBD
- Domain
- MBD domain
- PFAM
- PF01429
- TF Group
- Unclassified Structure
- Description
- The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.9 1.8e+04 -4.1 0.0 33 48 452 467 450 468 0.83 2 2 2.3e-15 8.7e-12 45.0 0.0 5 61 788 843 784 901 0.90
Sequence Information
- Coding Sequence
- ATGGCCGTAAAACATTGTTGCATAGACACATGTAAATCCTGCTCAACAAGAAAGGAAGACAATGGTGTCACATACCACAGATTTCCAAAAGATCCAGTTTTACGTAACACCTGGATGTCTTTAACTTGTTGCAATAATTTAGACTTGCCGAACTATGTGTGCTCGAGACATTTCtgtaaaaatgattttcaaCCATATAAGGACTCTAAATACATACTAAAGTCAGATGCAGTACCTTCAATTTTTCCATGGACAATGTCTGATGTAACTAGTAACACTGAGATGGAAACTGGAGATACCAAATCCGATGATGATGTTTTAGATccaccagaaacaaaaaatgaattaaataccTCAGGTAGTAGTAAGGAGTCTGATGAAAATGTGGATGCTATAAGAAAATTTATTGAAGATCAAGATAAAGAATTTCGTGACAAAAATGATTCTGAAAATATTACAGAGGATGTTCAAACAGAGATAAACAGCAACAATGTAGGTGACAATGAAAATGATGAAAGTGCAGCTAAAGATCTACAAATTGATAATGTCGAAATTGCcagtaaaaatgtaaataataacaatgatgaAAGTGCCAGCAAAGATATCAATAATGACACTGATGAGGCTGTTAGTAATGATTTTGCTAAAAATGACAATGAAGGCACAATTGTTGTTGCTACCAGTGTTATGAATATGATACTAGATGAATCAGAGGTGAAAATAGAAAATAAGAAAGACTCAACACCAGTTTCTAAGTATAGTTTGACTCCGGATAAAGCTGTCAGTGGCAGTATTTCTCTCTCAGTTGGTTCAAAAATTGAAGCCAAAGATTTCGGCGACGAATGGCATCCGGCGCAGATCGTGGAGGTCGATTATGAAGAAATGGAAGTATTGGTCCATTATGAACCACACAACAAgagACATGATGAATGGATCAGCGTGAGCAGTCCACGGTTACGACCAATAACAGACACTCCTAAATGTGAAACAAATGTAGCAGAAAAGATGCCAGAACAGACTGCACCAGTCAAAGAAGAAATTAAAGAAGTAAAGGTAGAAGAGAAACCGAAAATAACTTTCGCAGTTGGAGAAAGATGTCTGGCTCGTTGGAGGGATAATAGGAGGTTTATAGCTACCATACATAATGATTTGGGAAATGGTACCTATGAAATAATATTCGACGATGGTTTTCAATGGAAGTGCAGTGTATCAAGGCTTTATAAGTGGAAACCGACGGGAAAGCAAGATCTTCTGACAGTAGACACATCCTTACAGTCTACTACGGGAGCCCCATCTCCGATACAAGTTGGTGGCCCAAGCACTGCAGGCCCGCTTAACCAACCAGCTTTTCACACTCATTTATTTGATCCCACACGAGATTACCTAAGTTCTAAAAGTGAACGTCGTGAaatgaaaagaaaattaaacatTAAAGAGATATTTAATATTGGACAAAAGAGACAGAAAACAAAAACTGATACCATTGTCAGGAAGCCAAGGATTATAAGAAGGACCCCTAAAGTTAAAATTGAACCGTATTTCAAAAAGGAACTGAAAGTTCAACTTAAAAGGGAGATACCTGATGCTGTTGCTTCTATTATTGGTACGGTAAGTAAAGAGGAGCCTGGGATAACAGAAATAGGAAGCGAAGATATTATCGAAGTTAAACTAGAAGAGATAGATAAGGATGACAATGAAATTACGGATGTTAAAGAACTAGAAAGTGCTGACACACAGGTAGCGGATGATTTTAAAATGGATCCATTTAAAGCAGAACTAGACCCTGTACACGAAGAAGATGTAAAACTTGAAAAATTTGATAAGCAAGATGACGGTAAGCACGAAGAAGTAATTGATAGGATTAAGGAGGTAATAAACAAGCTAGAAGGTGGGTTAACTGATGAGAAGTTAAATTCTCCTAAAATAGAAATCAAAGAAGAAATACCAATTCTTAACGAAATTGACCCTGTAGATGCAAAAGAAGAATCAGGCGTGGACGTTGTTGTAGATGCCAAAGCAGAAGCAACTATTGtaccaaaaacaaaattaaaaaaattatcaaagaTAAAGAAAAGTAAGAAACTAAGAATGTTGCAGGAGAAAAAGGTAAAGAAACAAGTTGAAAAGGTGAAAAACGAACTGGAAGAGATGAAAAGGCAAGTGGAAGAGATGAGAAAGCAGATGTTGCTGAAAACGCAAGAGCTTGCGAAGGGGCAATCCGAGATGCCAGAAAGCTTTCTGTTGCCCGGAGAATGGTGCTGTCGTTGGTTAAACGGACAGCCTGTTGGAACTGTCAGTGAAATTGTATGCGAGGTTAAAGTTCATGGAGATGGGAAACCAGGATTGCCGCGGCGAAGTGTACaggtgGAAGATAAGCGGTTACCTCCAGGGTGGACGAAACACATGGTGCGAAGGAGTTTGGGACATTCAGCTGGGAAGTGGGATGTTGTGCTTGTTAGCCCAGAAAACCGTCGTTTCCACACTAAAACAGACATGCGTAATTACTTAGAAAACAGTCCCGATGAATCTATTAAGCAGTACGAAGGGGCTTTGATGGATTTCGGTGTGCATTTAAAGTTGGCCCGGCGTATGGGGTGGATCACGACTACTCCGGGAGGAGTAGCAGATGGGCCTTCGTTACCATGTGGCACCTTACATAGCACCTCACCTTTGGTTAAGAGGAAGAAATTAAACCTTAAAAAGTCTGAAAAGAAGAGCGGGGAGAAGAAAAATCgagacaagaaaaacagagATAAAAAGAAGAAATCTTTGCGGATGAAGTTGGCTATGGCTTCTCAGAATATTGTTGACGGGACAATGAATATGTATACCACTTCTGATACGGTGCAGACGCCAGAACCTGTCCTCGACACTTTGACATTAGAAGATGGTTACGTGTATGTTGGTTCCCTCAAAGTACAAATAATAGAGAATCTCCTCCGATGTCCAGCCGAAGGTTGTTTCAAAAATTTTCGAAATAATACACTTTTACAAATGCATATCAAACATTACCATCGTGAATTGAGAGGAAAGTTAGGCGACACACCGAAAGTTCTAGACTTGGCATATGCGAGAACTATGCCATTGCTGCCTGATACGCCTAGACAAGTGGATTCTAAAGTTATAAAGGTGAAAATACCAAGGCCGAAACGTGAAGAGCCGAAACTTGAACCCATTGACGTTAAACCTGATTTGCTTATTGATACTGAACCTAAAACGCCACTTGGTCAAGACAACGATAGTAATCCGAAGACACAAGACTCGCCCAAGTTGCGGGATGCTTTGGTCAACAAGCCAGTGAAAAGACCAAAGGTTTTACTGCCAGTTAGGAGACCGGAGTTTGATCCAGAACCATCTATTGTGGAGGATTATGGTGAATTGGCAGAAATACCAGTTGGTGACTGTTTGATTGAAGCATTAGATTTTGAAACTGCAATTTCAACTCATACTGTGACTAAGCCGATTTCTGAAAAGCCAAGAAAAGGCGAGAGGCAGCCAATATCTTCAACAGTGATGTCACAGAAGGCGAGTGAAGATGAGGAATGGTACGTAAATTCTGATTACGAGACGAGATCTAGTTTCCCACGATCTGGCTCGCCGGACTCGAAGTCTGCTGAGATGCAGTTGGTCAAGACAGAGGATTTTACGCCAGAGTCCAATGAAGAACAAAAAGAGTCACAGAAGTATACATACACCGAAAACGGCGAGCGAGTGAAGATAGTGCACATGAAGCGAGAGGAGATCATCAACTGCCACTGTGGGTTCCGTGAGGAGGACGGGCTCATGGTGCAGTGCGAGCTCTGTCTGTGTTGGCAGCACGCGCTCTGCCACAACATACAGAGCGAGGCGCAGGTGCCGGAGAAGTACACGTGCAGCATCTGCCTGAACCCGCGGCGCGGGCGTCGCTCGGCGCGGTTCGTGCACGACCAGGACCGGCTGTACGAGGGCGTGCTGCCGGGCGCGCGCGCCTGCGACCTGCTGCGCCGCTCGCACGAGCTCTCCGGGAACTTGCTGCGCATGAGCGACGCGCTGCACGCGCTCAGGGTCAAGTGCTTCGTCGCCGCTAAAAAAGACCATCCAAAGCTGTACCTATGGGCGAAAGATTGGGAGCATGCAGAGATATCGTACACTCAAGAGAAACTGAACTCTGACTACTCTGACCTGAACATAATGATCAACACCGTGGGGAAGGAGAACATGCCGATGAAACCTGAGGATATGAAGGACATGCAGCTCGGCCTGTCATCTGACGATACCGATCTTGATAGGTTTTCGCATAGAGATAATCAACTGAGTTCGAACGCGCTGTTGAACAACTTGCTGTCCAGTCCAGGCGGGGCGTCCCTCGACCTGCCTATAAGTACCTCAGAGCTGGAGACCCTCGCGAAATCAGTTCAAGAGCAAGAGTGTTCTGTGCCCGGAGTGGGGGTGGGTGTGGGGGTGGGAGTCGGAGTCGGAGTCGGAGTGGTCGTCCCCGCGCCGCAGCCCGAGGCGGCGATCGAGAACGGCGCGTGTCGCGTGCGGCTGGTGCGGCACCTGCAGCGGTGCCACGCGCTGCTCGACGCGAGGCTCGACTCCATCGAGGCGCAGGTCGCAGAATTAGAGTCCCAAGACCCATCGTTCGAAGATGACGAGACGCCCGATTTCATCCCGCGAACTAAACAAACGGTGCAGATGCTATTACGAGACCTTGATACTATGGAAGAGTTGGGGACTATTACATAA
- Protein Sequence
- MAVKHCCIDTCKSCSTRKEDNGVTYHRFPKDPVLRNTWMSLTCCNNLDLPNYVCSRHFCKNDFQPYKDSKYILKSDAVPSIFPWTMSDVTSNTEMETGDTKSDDDVLDPPETKNELNTSGSSKESDENVDAIRKFIEDQDKEFRDKNDSENITEDVQTEINSNNVGDNENDESAAKDLQIDNVEIASKNVNNNNDESASKDINNDTDEAVSNDFAKNDNEGTIVVATSVMNMILDESEVKIENKKDSTPVSKYSLTPDKAVSGSISLSVGSKIEAKDFGDEWHPAQIVEVDYEEMEVLVHYEPHNKRHDEWISVSSPRLRPITDTPKCETNVAEKMPEQTAPVKEEIKEVKVEEKPKITFAVGERCLARWRDNRRFIATIHNDLGNGTYEIIFDDGFQWKCSVSRLYKWKPTGKQDLLTVDTSLQSTTGAPSPIQVGGPSTAGPLNQPAFHTHLFDPTRDYLSSKSERREMKRKLNIKEIFNIGQKRQKTKTDTIVRKPRIIRRTPKVKIEPYFKKELKVQLKREIPDAVASIIGTVSKEEPGITEIGSEDIIEVKLEEIDKDDNEITDVKELESADTQVADDFKMDPFKAELDPVHEEDVKLEKFDKQDDGKHEEVIDRIKEVINKLEGGLTDEKLNSPKIEIKEEIPILNEIDPVDAKEESGVDVVVDAKAEATIVPKTKLKKLSKIKKSKKLRMLQEKKVKKQVEKVKNELEEMKRQVEEMRKQMLLKTQELAKGQSEMPESFLLPGEWCCRWLNGQPVGTVSEIVCEVKVHGDGKPGLPRRSVQVEDKRLPPGWTKHMVRRSLGHSAGKWDVVLVSPENRRFHTKTDMRNYLENSPDESIKQYEGALMDFGVHLKLARRMGWITTTPGGVADGPSLPCGTLHSTSPLVKRKKLNLKKSEKKSGEKKNRDKKNRDKKKKSLRMKLAMASQNIVDGTMNMYTTSDTVQTPEPVLDTLTLEDGYVYVGSLKVQIIENLLRCPAEGCFKNFRNNTLLQMHIKHYHRELRGKLGDTPKVLDLAYARTMPLLPDTPRQVDSKVIKVKIPRPKREEPKLEPIDVKPDLLIDTEPKTPLGQDNDSNPKTQDSPKLRDALVNKPVKRPKVLLPVRRPEFDPEPSIVEDYGELAEIPVGDCLIEALDFETAISTHTVTKPISEKPRKGERQPISSTVMSQKASEDEEWYVNSDYETRSSFPRSGSPDSKSAEMQLVKTEDFTPESNEEQKESQKYTYTENGERVKIVHMKREEIINCHCGFREEDGLMVQCELCLCWQHALCHNIQSEAQVPEKYTCSICLNPRRGRRSARFVHDQDRLYEGVLPGARACDLLRRSHELSGNLLRMSDALHALRVKCFVAAKKDHPKLYLWAKDWEHAEISYTQEKLNSDYSDLNIMINTVGKENMPMKPEDMKDMQLGLSSDDTDLDRFSHRDNQLSSNALLNNLLSSPGGASLDLPISTSELETLAKSVQEQECSVPGVGVGVGVGVGVGVGVVVPAPQPEAAIENGACRVRLVRHLQRCHALLDARLDSIEAQVAELESQDPSFEDDETPDFIPRTKQTVQMLLRDLDTMEELGTIT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00341387; iTF_00858567; iTF_00858619; iTF_01010378; iTF_01010456; iTF_00063614; iTF_00063671;
- 90% Identity
- iTF_00341387;
- 80% Identity
- iTF_00341387;