Cced013491.1
Basic Information
- Insect
- Cinara cedri
- Gene Symbol
- Runx3
- Assembly
- GCA_902439185.1
- Location
- CABPRJ010002368.1:523087-533653[-]
Transcription Factor Domain
- TF Family
- Runt
- Domain
- Runt domain
- PFAM
- PF00853
- TF Group
- Beta-Scaffold Factors
- Description
- The AML1 gene is rearranged by the t(8;21) translocation in acute myeloid leukemia [1]. The gene is highly similar to the Drosophila melanogaster segmentation gene runt and to the mouse transcription factor PEBP2 alpha subunit gene [1]. The region of shared similarity, known as the Runt domain, is responsible for DNA-binding and protein-protein interaction.In addition to the highly-conserved Runt domain, the AML-1 gene product carries a putative ATP-binding site (GRSGRGKS), and has a C-terminal region rich in proline and serine residues. The protein (known as acute myeloid leukemia 1 protein, oncogene AML-1, core-binding factor (CBF), alpha-B subunit, etc.) binds to the core site, 5'-pygpyggt-3', of a number of enhancers and promoters.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.1e-61 1.2e-57 193.2 0.1 2 128 16 144 15 145 0.96 2 2 0.41 1.6e+03 -1.2 0.0 11 30 308 327 304 330 0.88
Sequence Information
- Coding Sequence
- ATGGACGTCGACGCGGTGTACCAAAAGTACGTGGCGTGCATTCTGGAGGACGTCCGAGCCATTCATGGCAAAGAAATGGTGGCCACGGGCAGCCCGTCCGTATTCTGTTCCGTATTGCCCGGTCACTGGCGGTCGAACAAATCGCTGCCAATACCATTCAAAGTGGTCGTGTTGGACGAAGTGCCAGACGGGGCCGTGGTCGTCGTGCAAGCCGGAAACGACGAGAACCCGTCGGCCGACATGCGAAACTACCGGGCCCTGTCAGCCACCGGCGTAGCCGTCTTCAACGATCTCCGGTTCGTCGGCCGCAGCGGAAGAGGTAAACTGTTAACGCTCACCATCACAGTCCAATGTAAAGATCGAGTAGTATTGGTCGCCAATTACATTAAAGCCATCAAAATTACTGTCGACGGACCGCGATTGCCGCGATCCAACCACAGAGACGTGATACACGGTTACGGCGGTATGTTTCCCATGCACGGGCCTTTGCCGCCTTACGGAATGATCATGGAATACAAACGGCTGCTGGAAGGGGCTGCGTTGCCGGGGTCACTAAACTACCAATACATAGCGGCCAATTACTTCCAACTTCACAACGCGATGGAAGCGTCGCAAATGTACTGCGACATGCCACCCCTGCAGTCGGCGTTCAACTTCGCCGGTTACCAGCACAGCTTGCCACCCACGCCGCCGCACACCGAGGAAGAACCGGTCACGGCGCCGCCGGCGACGGCCGTGCGCGACAATAACGGCCGTTCAGGCGCGCGTCCGAAACGGCCCGCGTCCCTGTCCGAGTCCGTGACGACGACCACGGCTGTTTCGACCGCGTCCGCGCCCGAACGACCCACGCGGCATCCGCTGCAGGAGTCGTGCAAGCGACCCAAACGCGAGTCGGCCGCCAGCCCGGACATTGACATCGTCAATGTCGTGCGGTCGTCCAGTCCGGACGTGCTCAAACCCCGGCAAGAAAAAATCTGGCGGCCTTACGGCGCCACCGACGAATAA
- Protein Sequence
- MDVDAVYQKYVACILEDVRAIHGKEMVATGSPSVFCSVLPGHWRSNKSLPIPFKVVVLDEVPDGAVVVVQAGNDENPSADMRNYRALSATGVAVFNDLRFVGRSGRGKLLTLTITVQCKDRVVLVANYIKAIKITVDGPRLPRSNHRDVIHGYGGMFPMHGPLPPYGMIMEYKRLLEGAALPGSLNYQYIAANYFQLHNAMEASQMYCDMPPLQSAFNFAGYQHSLPPTPPHTEEEPVTAPPATAVRDNNGRSGARPKRPASLSESVTTTTAVSTASAPERPTRHPLQESCKRPKRESAASPDIDIVNVVRSSSPDVLKPRQEKIWRPYGATDE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01169633; iTF_01499428; iTF_00308614; iTF_00468744; iTF_01346248; iTF_01432812; iTF_00184382; iTF_00018789; iTF_01032657; iTF_00463133; iTF_01350175; iTF_01328389; iTF_01037521; iTF_01031730; iTF_01167379; iTF_00940150; iTF_01303961; iTF_01304633; iTF_00972828; iTF_00134015; iTF_00135088; iTF_00135931;
- 90% Identity
- iTF_01499428;
- 80% Identity
- -