Basic Information

Insect: Cheilosia vernalis
Gene Symbol: pnr
Assembly: GCA_949126925.1
Location: OX421358.1:14755837-14757333[+]

Transcription Factor Domain

TF Family: zf-GATA
Domain: zf-GATA domain
PFAM: PF00320
TF Group: Zinc-Coordinating Group
Description: This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 4e-18 1.8e-14 53.8 3.2 1 34 118 150 118 152 0.97

2 2 6e-19 2.8e-15 56.4 6.2 1 35 172 205 172 206 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	4e-18	1.8e-14	53.8	3.2	1	34	118	150	118	152	0.97
2	2	6e-19	2.8e-15	56.4	6.2	1	35	172	205	172	206	0.98

Sequence Information

Coding Sequence: ATGTTCCACTCGAGTTCGGGTTACCCCGACATCACTGGCGGCTCGGGCAATGCCGTCGCCTACCATCAGCAGGCAGCTGCAGCTGCTGCAGCCAGCACTCCAGTTTATGTTCCTTCGAATCGTGCCCTGACGCACAGTCAGTACGGACATGCCGCTGCCCATTTTGGCACAGCGGCCGCCCAAAATGCCTGGACGGCAGACAGCTTCGGGGCAACACACTCGCAAATACCCGCCCAATTCTATGCCCAGAACGTGATGATGGGCACCTGGCGAGCATACGATCCCACGGGATTCCAACGCACCTCGCCGTACGACAGTGCCATGGAGCTGCAATTCGGCGAGGGACGCGAATGCGTCAATTGTGGGGCAATTAGTACGCCACTATGGCGACGCGACGGAACCGGACACTATCTTTGCAATGCATGCGGACTGTACCACAAGATGAATGGCATGAATCGGCCGCTGATAAAGCCCAGCAAGAGATTGACTGCTACACGACGACTGGGACTGTGCTGTACGAACTGTGGAACACGAACGACGACACTGTGGCGGCGCAATAACGAGGGCGAACCAGTTTGTAACGCATGCGGTTTGTACTTCAAGTTGCATGGCGTAAATCGTCCGCTGGCGATGCGCAAAGATGGCATCCAGACGAGAAAACGAAAACCCAAAAAGTCTGGTGGCGATTCGAAGGACTCCAAGGAGGAAGTCGACCTGAAGCCATCGTTAACCAGTGCATCGTCACTTTCCCTCGAACGAAGTCTCGCATCCTCGAAGCTGAGTGCCGATCTTAGCCCCAAGCAATCGTCGAACTCACTCTCGCACAATCACATGCACTtgccatcgtcatcgtcgtcgagAACGCACAGCACCTCGAATCATGTCTACTCCTCGAATATGCATGGGGTAACCACCTCTCACAGCAACACTGGCAACAGTGGCTTGTCATTTGGGGCTGCTGCCTCGAAGTATGAACACCTATTGGCATCATCGACTGGCGGAAGTAGTAATACGAGTCTTAGCTCGGCGCTGACTAATGGCATTGGAACTGGGACACCGAGTCCGAACTATCATCATGCCCACCACCATCCGCATCATCACCATGcccatcatcaccatcatcatgcCGGTCTGGGGCAGCACACCTATGGAGTCAAGTCTGAAGCTAATACAACCAACTATGATTATGTGAATAATTGTTACTTTGGTGGGACGTTCGGTGCGCTGAGCGCTTCTTCGGCCGGTGCGGCGGTGCATGGAGCGTCAGAACTTGCCGGCTACCACCATCAGCACAATGTCATTCAGGCTGCCAAGTTAATGGCGTCATCTTAA
Protein Sequence: MFHSSSGYPDITGGSGNAVAYHQQAAAAAAASTPVYVPSNRALTHSQYGHAAAHFGTAAAQNAWTADSFGATHSQIPAQFYAQNVMMGTWRAYDPTGFQRTSPYDSAMELQFGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLTATRRLGLCCTNCGTRTTTLWRRNNEGEPVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKPKKSGGDSKDSKEEVDLKPSLTSASSLSLERSLASSKLSADLSPKQSSNSLSHNHMHLPSSSSSRTHSTSNHVYSSNMHGVTTSHSNTGNSGLSFGAAASKYEHLLASSTGGSSNTSLSSALTNGIGTGTPSPNYHHAHHHPHHHHAHHHHHHAGLGQHTYGVKSEANTTNYDYVNNCYFGGTFGALSASSAGAAVHGASELAGYHHQHNVIQAAKLMASS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00315598; iTF_00313926; iTF_01223878; iTF_01542597; iTF_00241842; iTF_01223879; iTF_00311465; iTF_00314809; iTF_00390026; iTF_00241216; iTF_00664523; iTF_00426785; iTF_00335524; iTF_00975268; iTF_00188646; iTF_00665289; iTF_00673162; iTF_01045131; iTF_00984684; iTF_00427758; iTF_00313108; iTF_00312246; iTF_01212438; iTF_00672537; iTF_00695129; iTF_00694263; iTF_01357593; iTF_01396153; iTF_01396985; iTF_01318686; iTF_00689088; iTF_00894431; iTF_01003216; iTF_00671273; iTF_00671876; iTF_01116822; iTF_00992225; iTF_01523041; iTF_01522249; iTF_01301316; iTF_01254473; iTF_00310670; iTF_01521554; iTF_01300469; iTF_00725176; iTF_01541821; iTF_00976990;
90% Identity: iTF_00390026;
80% Identity: -