Pper001918.1
Basic Information
- Insect
- Pocota personata
- Gene Symbol
- pnr
- Assembly
- GCA_963082735.1
- Location
- OY720429.1:24346626-24347861[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-16 1.1e-12 49.0 2.8 1 34 103 135 103 137 0.97 2 2 4.6e-19 3.9e-15 56.8 6.2 1 35 157 190 157 191 0.98
Sequence Information
- Coding Sequence
- atgTTCCACTCGAGTTCAGGTTATCCCGACATTACTGGCGGTTCAGGCAATGCCATCTCCTATCATCAACAAGCAGCCGCTCTAGCTGCAGCCAGCACTCCAGTTTATGTTCCTTCAAATCGTGCCCTCTCACACAGTCAGTATAGTCATGCCGCTGCCCATTTTAGTACAGCTGCGGCAGATAGCTTCGGAGCAACACACTCACAAATACCCGTCCAATTCTATGCCCAGAATGCGGTAAAAATGGGCGCCTGGCGAGCTTACGATCCCACGGGATTCAAACGCATGGAGCTGGAGGGACGACAATGCGTCAATTGTGGGGCAAGCAGTTCGCCAATATGGCGACGCGACGGAACCGGACACTACCTTTGCAATGCATGTGGACTGTACCATAAGCTGAACGGCATGAATCGACCACTGGTAAAGCCCGGCAAGAGATTGACTGTTAAACGACGACTGGGGTTATGCTGTACGAATTGTGGGACCCGAACGACGACGCTGTGGCGGCGTAATAACGAGGGCGAACCAGTTTGTAATGCATGCGGCCTGTACTTTAAGCTGCATGGCGTAAATCGTCCGTTAGCAATGCACAAAGATGGCATCCAGACAAGACAACGGAAACCCAAAAAGTCTGGTGGTGATTCAAAGGATTCCAAAGAGGATGTGGATTTGAAACCATCGTTAACCGGTACATCGTCACTTTCCCTCGAATGTAGTCTCGCATCATCGAAATTGAGTGCTGATCTTAGCCCCAAGCAATCAACACCCTCACACAACCTCATGCATTTGCCATTATCATCGTCGCCTTCACGAACGCACAGCACCTCCAATCATGTGTACTCTTCGAATATGCATGGGATACCCACCTCGCACAGTAACACTGGCAACACTGGTTTGTCATCTGACACTGCCACCTCGAAGTATGAGCACCTATTGGCCTCGTCCACTGGCGGAAGTGGTAATACAAGTCTCAGTTCGGTGCTGACTAATGGAATTGGAATTGGGACGCCGAGTCCGAACTATCATCATGCCCACCATCATCCGCACCATCATCATGCCGCACTGGGGCAACATACTTATTAG
- Protein Sequence
- MFHSSSGYPDITGGSGNAISYHQQAAALAAASTPVYVPSNRALSHSQYSHAAAHFSTAAADSFGATHSQIPVQFYAQNAVKMGAWRAYDPTGFKRMELEGRQCVNCGASSSPIWRRDGTGHYLCNACGLYHKLNGMNRPLVKPGKRLTVKRRLGLCCTNCGTRTTTLWRRNNEGEPVCNACGLYFKLHGVNRPLAMHKDGIQTRQRKPKKSGGDSKDSKEDVDLKPSLTGTSSLSLECSLASSKLSADLSPKQSTPSHNLMHLPLSSSPSRTHSTSNHVYSSNMHGIPTSHSNTGNTGLSSDTATSKYEHLLASSTGGSGNTSLSSVLTNGIGIGTPSPNYHHAHHHPHHHHAALGQHTY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00316441;
- 90% Identity
- -
- 80% Identity
- -