Cpag016408.1
Basic Information
- Insect
- Cheilosia pagana
- Gene Symbol
- pnr
- Assembly
- GCA_936435595.1
- Location
- CAKZFE010000064.1:3995248-3996746[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.1e-18 1.2e-14 53.8 3.2 1 34 118 150 118 152 0.97 2 2 7.7e-19 1.8e-15 56.4 6.2 1 35 172 205 172 206 0.98
Sequence Information
- Coding Sequence
- ATGTTCCACTCGAGTTCGGGTTATCCCGACATCACTGGCGGTTCGGGCAATGCCGTCGCCTATCATCAGCAGGCAGCTGCGGCTGCCGCAGCCAGCACTCCAGTCTATGTTCCTTCGAATCGCGCCCTGACGCACAGTCAGTATGGGCATGCCGCTGCCCATTTTGGTACAGCTGCCGCCCAAAATGCCTGGACGGCGGACAGCTTCGGCGCAACACACTCACAAATACCCGCCCAATTCTATGCCCAGAATGTGATGATGGGCACCTGGCGAGCATACGATCCCACGGGATTCCAACGCACCTCGCCGTACGACACTGCCATGGAACTGCAATTCGGCGAGGGACGCGAATGCGTCAATTGTGGGGCAATTAGTACGCCACTATGGCGGCGCGACGGAACCGGCCACTATCTTTGCAATGCATGCGGACTGTACCACAAGATGAATGGCATGAATCGGCCGCTGATAAAGCCCAGCAAGAGATTGACGGCTACACGACGACTGGGACTGTGCTGTACGAACTGTGGCACACGAACGACGACACTGTGGCGACGCAACAACGAGGGCGAACCAGTTTGTAACGCATGCGGCCTGTACTTTAAGTTGCATGGCGTGAATCGTCCGCTGGCGATGCGCAAAGATGGCATCCAGACGAGAAAACGaaaacccaaaaagtctggtggCGATTCGAAGGACTCCAAGGAGGAAGTCGACCTGAAGCCATCGTTAACCAGTGCATCGTCACTTTCCCTCGAACGAAGTCTCGCATCCTCGAAGCTGAGTGCCGACCTTAGCCCCAAGCAATCGTCGAGCTCCCTCTCACACAACCACATGCATTtgccatcgtcatcgtcgtcgagAACGCACAGCGCCTCGAATCATGTGTACTCCTCGAATATGCATGGGGTTACCACCTCTCACAGCAACACCGGCAACAGTGGTTTGTCATTTGGCGCTGCCGCCTCCAAGTATGAACACCTATTGGCATCATCGACTGGCGGTAGTAGTAATACGAGTCTTAGCTCGGCGCTGACTAGTGGCATTGGAACTGGGACACCGAGTCCGAACTACCATCATGCCCACCATCATCCGCATCATCATCATgcccatcatcaccaccatcatGCCGGTCTGGGCCAGCACACCTATGGAGTCAAGTCTGAAGCTAATACAACCAACTATGACTATGTGAATAATTGTTACTTTGGAGGGACATTCGGTGCGCTGAGCGCTTCTTCGGCCGGGGCGGCGGTGCATGGAGCGTCAGAACTTGCCGGCTATCACCATCAGCACAATGTCATTCAGGCTGCAAAGTTGATGGCGTCATCTTAA
- Protein Sequence
- MFHSSSGYPDITGGSGNAVAYHQQAAAAAAASTPVYVPSNRALTHSQYGHAAAHFGTAAAQNAWTADSFGATHSQIPAQFYAQNVMMGTWRAYDPTGFQRTSPYDTAMELQFGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLTATRRLGLCCTNCGTRTTTLWRRNNEGEPVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKPKKSGGDSKDSKEEVDLKPSLTSASSLSLERSLASSKLSADLSPKQSSSSLSHNHMHLPSSSSSRTHSASNHVYSSNMHGVTTSHSNTGNSGLSFGAAASKYEHLLASSTGGSSNTSLSSALTSGIGTGTPSPNYHHAHHHPHHHHAHHHHHHAGLGQHTYGVKSEANTTNYDYVNNCYFGGTFGALSASSAGAAVHGASELAGYHHQHNVIQAAKLMASS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00316441;
- 90% Identity
- iTF_00390026;
- 80% Identity
- -