Rros014332.1
Basic Information
- Insect
- Rhingia rostrata
- Gene Symbol
- pnr
- Assembly
- GCA_949824845.1
- Location
- OX463756.1:130703904-130705413[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.4e-18 1.7e-14 53.8 3.2 1 34 120 152 120 154 0.97 2 2 5.1e-19 2.6e-15 56.4 6.2 1 35 174 207 174 208 0.98
Sequence Information
- Coding Sequence
- ATGTTCCACTCAAGCTCGGGCTATCCGGACATCACCGGTGGGTCCGGCAATGCCGTCTCCTATCACCAGCAAGCGGCTGCGGCTGCCGCTGTCAGCACTCCAGTTTATGTTCCTTCAAATCGTGCCCTGTCGCACAGTCAGTACGGACATGCCGCTGCCCATTTTGGTACAGCGGCCGCCCAAAATGCCTGGACTGCGGCAGATAGCTTCGGTGCAACACACTCACAAATACCCGCCCAATTCTATGCACAGAACGGGTTAATGATGGGCACCTGGCGAGCATACGATCCCACGGGATTCCAACGCACATCACCATATGACAGTGCCATGGAGCTGCAATTCGGCGAGGGACGCGAATGCGTCAATTGTGGGGCTATTAGTACGCCACTATGGCGACGCGACGGAACCGGACATTATCTTTGCAATGCATGCGGACTGTACCACAAGATGAATGGCATGAATCGGCCGCTGATAAAGCCCAGCAAGAGATTGACTGCTACACGACGACTGGGACTGTGCTGTACAAACTGTGGGACACGAACGACGACACTGTGGCGACGCAACAACGAAGGCGAACCAGTTTGTAACGCATGTGGCCTGTACTTTAAGTTGCATGGCGTAAATCGTCCACTGGCGATGCGCAAAGATGGCATCCAGACTAGAAAacgaaaacccaaaaagtctGGTGGTGATTCGAAGGATTCCAAAGAAGATGCGGATCTAAAACCATCGTTAAACAGTGCATCGTCACTTTCTCTCGAAAGAAGCCTCGTATCGTCAAAGTTGAGCGCTGATCTTAGCCCGAAGCAGTCGTCGAACTCGCTCTCGCACAACCATATGCATTTGCCATCTTCGTCATCGTCGCGAACACACAGCACTTCGAATCATGTGTACTCGTCAAATATGCATGGAGTGTCGACACCTCACAGCAACACTGGCAACACTGGTCTGTCATTTGGTGGCGTGTCCTCAAAGTACGAACACCTATTGGCATCATCGACTGGCGGCAGCAGCAATACAAGTCTTAGTTCAGCGCTGACTAATGGTATTGGAACTGGAACACCGAGTCCGAACTACCATCATGCCCATCATCATCCGCATCATCATCAtgcacatcatcatcatcatgcgGGACTGGGGCAACACACCTATGGAGTGAAGTCTGAAGCGAATACAACAAACTACGACTACGTGAATAATTGTTACTTTGGTGGAACATTCGGAGCGTTAAGCGCATCATCAGCCGGTGCGGCGGTACATGGAGCGTCGGAACTTGCCGGCTATCATCATCAACATAATGTCATTCAAGCTGCAAAATTAATGGCGTCATCTTAA
- Protein Sequence
- MFHSSSGYPDITGGSGNAVSYHQQAAAAAAVSTPVYVPSNRALSHSQYGHAAAHFGTAAAQNAWTAADSFGATHSQIPAQFYAQNGLMMGTWRAYDPTGFQRTSPYDSAMELQFGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLTATRRLGLCCTNCGTRTTTLWRRNNEGEPVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKPKKSGGDSKDSKEDADLKPSLNSASSLSLERSLVSSKLSADLSPKQSSNSLSHNHMHLPSSSSSRTHSTSNHVYSSNMHGVSTPHSNTGNTGLSFGGVSSKYEHLLASSTGGSSNTSLSSALTNGIGTGTPSPNYHHAHHHPHHHHAHHHHHAGLGQHTYGVKSEANTTNYDYVNNCYFGGTFGALSASSAGAAVHGASELAGYHHQHNVIQAAKLMASS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00316441;
- 90% Identity
- iTF_00390026;
- 80% Identity
- -