Crub036433.1
Basic Information
- Insect
- Cerastis rubricosa
- Gene Symbol
- -
- Assembly
- GCA_949152445.1
- Location
- OX424547.1:6477769-6482135[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.3e-40 5e-36 126.1 2.5 99 275 5 177 1 177 0.96 2 2 0.77 9.1e+03 -2.7 0.0 253 270 200 217 183 230 0.51
Sequence Information
- Coding Sequence
- ATGTGTGTGCCAAGAACGTGGAACCCGCGCATGCCGGGCGCAATGGTCCGCGCGGTGTCGGCGTGGCAGAGCGCGGCGCCCGCGTGGCTGGCGCGCGCCTGCGTCGTGCGCTGCGTGCTGCCGCGCGTACTGGCCGCCGTGCGCGCCTGGGACCCCACCAACGATACGCAGCCGCTGCACCAGTGGGTCCTGCCCTGGCATGATATGGCAGGTGAAGCCCTAGCCAGCTCAGTGTACCCGCTGATCCGCTCCCGCCTGGCGGCCGCGCTGTCGGCGTGGCACCCGGCCGACGGCTCCGCGCGCGGCGTGCTGCGGGCCTGGCGCGGCGCCTGGGGACCCGCGCTGCACGCCATGCTGCACCAGCACATCGTGCCCAAGCTGGACCACTGTCTGCAGCATGCGCCGCTGGAGCTTGTGGGCAGGGAGAACACGGCGTGGCTGTGGTGCGTGGAGTGGCTGGAGCTGCTGGGCGCGGCCACGGTGGGCGCGCTGGCGGCGCGGGCGCTGCTGCCGCGCTGGCTGGCGGCGCTGGCCGCCTGGCTCAACACCAACCCGCCGCACGCCACTGTGCTCAACTCATATACGGATTTTAAGAAAATGTTCCCCGAAGAGGTCCTCAAAGAGCCTGCCGTTCGCGACGCCTTCCGAAAAGCACTAGACATGATGAACCGAAGCGCCGACATCGACTCCGTGGAACCGCCCCCTCCGCCCCGCTTCACTTTGCCCGAACCGAAGGAAATATCACACATATCCGACGTCTTAGGGACCGCTTTGCAAGCCAAAAGCTTCTCGGAGCTCCTTGAAACTCGGTGCATCGAAAAAGGCATTACTTTTGTACCTATAGCTGGAAAAACCAGGGAAGGTAGACCTCTGTATAAGATTGGCGAACTACAGTGTTATGTTATAAGAAATGTGATCATGTTTTCTAATGATAATGGTAGAACTTTCAATcctattagtatggataagttGTTGAATATGGTGGAGGagtattaa
- Protein Sequence
- MCVPRTWNPRMPGAMVRAVSAWQSAAPAWLARACVVRCVLPRVLAAVRAWDPTNDTQPLHQWVLPWHDMAGEALASSVYPLIRSRLAAALSAWHPADGSARGVLRAWRGAWGPALHAMLHQHIVPKLDHCLQHAPLELVGRENTAWLWCVEWLELLGAATVGALAARALLPRWLAALAAWLNTNPPHATVLNSYTDFKKMFPEEVLKEPAVRDAFRKALDMMNRSADIDSVEPPPPPRFTLPEPKEISHISDVLGTALQAKSFSELLETRCIEKGITFVPIAGKTREGRPLYKIGELQCYVIRNVIMFSNDNGRTFNPISMDKLLNMVEEY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00375240; iTF_01030250; iTF_01526039; iTF_00677641;
- 90% Identity
- iTF_00375240; iTF_01030250;
- 80% Identity
- -