Xict029335.2
Basic Information
- Insect
- Xanthia icteritia
- Gene Symbol
- -
- Assembly
- GCA_949128155.2
- Location
- OX421952.2:13012012-13023704[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.9e-09 1.9e-05 25.6 0.2 106 159 2 50 1 53 0.94 2 4 1.7e-05 0.18 12.6 0.0 121 159 54 87 52 90 0.92 3 4 3.4e-34 3.6e-30 106.7 0.4 121 275 91 241 90 241 0.96 4 4 1 1.1e+04 -3.1 0.0 178 188 273 283 248 293 0.50
Sequence Information
- Coding Sequence
- ATGCCAACTCCGATGCTCCGCGCAGTGACGGCGTGGCAAGCCGCGGCGCCCGCGTGGCTGGCGCGCGCCTGCGTGTCGCGCTGCGTGCTGCCGCGCGTGCTGGCGGCCGTGCGCGCCTGGGACCCCACGCACGACACGCAGCCGCTGCACCAGCCGGGCCCCGCGTGGCTGGCGCGCGCCTGCGTGTCGCGCTGCGTGCTGCCGCGCGTGCTGGCGGCCGTGCGCGCCTGGGACCCCACGCACGACACGCAGCCGCTGCACCAGCCGGGCCCCGCGTGGCTGGCGCGCGCCTGCGTGTCGCGCTGCGTGCTGCCGCGCGTGCTGGCGGCCGTGCGCGCCTGGGACCCCACGCACGACACGCAGCCGCTGCACCAGTGGGTGCTGCCCTGGCATGATATGGCAGGCGAGGCGCTGGCCAGCTCGGTGTACCCGCTGATCCGCTCGCGCCTGGCGGCGGCGCTGGCGGCGTGGCACCCGGCGGACGGCTCGGCGCGCGGCGTGCTGCGCGCGTGGCGCGGCGCGTGGGGCGCGGCGCTGGGCGCGCTGCTGCAGCAGCACATCGTGCCCAAGCTGGACCACTGCCTGCAGCACGCGCCGCTGGAGCTGGTGGGCCGGGAGAACACGGCCTGGCTGTGGTGCGTGGAGTGGCTGGAGCTGCTGGGCGCGCCGACGGTCGCGGCCCTcgcggcgcgcgcgctgctGCCGCGCTGGCTGGCGGCGCTGGCGGCGTGGCTCAACACCAACCCGCCGCACGCTACTGTGCTCAACTCTTATACTGATTTTAAgAAAATGTTCCCGGAAGAAGTCCTCAAAGAGCCTGCTGTTCGGGACGCCTTCCGCAAAGCCTTAGACATGATGAATCGGAGCGCAGACATCGACTCAGTGGAGCCTCCCCCGCCGCCGCGCTTCACCATGCCCGAACCGAAGGAAACATCCCGTATAACAGAAGTTTTAGCATCCGCTACACAAGCGAAAAGCTTCTCAGAGCTACTTGAAACTAGGTGTATCGAAAAAGGGATCACTTTTGTACCTATAGCGGGCAAAACCAGGGAAGGTAGACCGCTGTATAAAATTGGTGATCTACAGTGTTATGTTATAAGAAATGTGATCATGTTTTCCAATGATAGTGGTAGGAGTTTCAACCCTATTAGTATGGATAAGTTGTTGAATATGGTTGAGgattaa
- Protein Sequence
- MPTPMLRAVTAWQAAAPAWLARACVSRCVLPRVLAAVRAWDPTHDTQPLHQPGPAWLARACVSRCVLPRVLAAVRAWDPTHDTQPLHQPGPAWLARACVSRCVLPRVLAAVRAWDPTHDTQPLHQWVLPWHDMAGEALASSVYPLIRSRLAAALAAWHPADGSARGVLRAWRGAWGAALGALLQQHIVPKLDHCLQHAPLELVGRENTAWLWCVEWLELLGAPTVAALAARALLPRWLAALAAWLNTNPPHATVLNSYTDFKKMFPEEVLKEPAVRDAFRKALDMMNRSADIDSVEPPPPPRFTMPEPKETSRITEVLASATQAKSFSELLETRCIEKGITFVPIAGKTREGRPLYKIGDLQCYVIRNVIMFSNDSGRSFNPISMDKLLNMVED
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00302127;
- 90% Identity
- -
- 80% Identity
- -