Crub032246.1
Basic Information
- Insect
- Cerastis rubricosa
- Gene Symbol
- Mblk-1
- Assembly
- GCA_949152445.1
- Location
- OX424543.1:17184630-17192854[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.7e-14 3.4e-11 44.0 0.0 1 38 91 129 91 132 0.93 2 2 1.2e-18 1.6e-15 57.9 0.0 1 43 303 346 303 348 0.95
Sequence Information
- Coding Sequence
- ATGATTTCGAAAGTGTTGTGGAAACCGTATGATATGTGTTTTAGTTACGATGATATGTTATATTACGCGTTGTGGAGGTTACCCCAGGAGGCATGTGAGAAGGCGCCGGCGTCTTCATCCCCCAACCTGGCGGAACAACCCCTGGACCTCAGCGCCAAGTCTACCTCCAGCACCAGCGGAACACCACCTCCTGACTCCAAGCATTTGGATAACAGATTGAAGCGAGCAGTTCTCGAAGGTGCCAGCAACAGCTCTAGTCGCCGCGGGTACACTGAAGAGGAGCTGCAAGCAGCCGTGCGGGATATCCTGTCGGGCCGGCTGGGCACCCGCCGCGCCGCGCTCATCTACGGCATACCGCGCTCCACTCTGCGCAACAAGCTCAACAAGCTCGGCTCCGTCGTCGACCACGCCGACTCCGACAACGACAGCGATGCCGACCGCGCCGACTCGCCTCCCTCCGTCATCCTCAAAATACCCACATTCCCCCCACCCGACGACAAGAGCCCATCCCCAGCTGGACAACACCAAGGCCCCACAGCGCCCATAACACCCATGCTCCCCACGGGACAAGGCTCACTCAAGCCACCCTCACAGCTGCTGCTCCCGCCCTCGGTGTTTGCCGACCCACCCTCAACACAACACCTATTCACGTCCCTCAGTGACGTAATCGCTAAAAGCATCAGCCAAAAGTTCCAGCAACCCTTAGATAGGCCGCACCACCAGCACCAGCCCAGCGAGATGATGTATGGGCGAGGTCCCGACCGACACGTGTCTGTTATTAAGACTCCGCCGGACAACCAGCGCTACCCCGCGCCCGGCAACTCTAAGCAGATGCCCAACAACAACGGTCAGCCGGCCGCCGGCGGCAAGGGCACGCGGCCCAAGCGCGGCAAGTACCGGAACTACGACCGCGACAGTCTGGTGGAGGCGGTGAAGGCGGTGCAGCGCGGGGAGATGTCCGTGCACCGCGCCGGCTCCTACTACGGCGTGCCGCACTCCACGCTCGAGTACAAGGTGAAGGAGCGCCACCTCATGCGGCCGCGCAAGCGCGAGCCCAAGCCGCCGCAGGACGCCACCAAGCCGCAGCCGCCCAAGCCGCCGCCGCCCAAGCCGCCCACGAAGCCGTTCTCCAACGGACTCAACGGGCCGGAAGCCCCGGGCTACCCCCCCGGCTACCCGTTCTGGCCCGGCAGCGGCTTCCCTCCGCCGCCCGCCCCGGACCTGTACGCGTCGCACATGATGCGCCGGCTGCGCGAGgaggcgccgccgcccgccaaCGGCTCGTTCCTGGAGGGCATCATCCGCTCGTCGCTGGAGCGGCCGGCGCTGCTGCAGCGCCTGGCCGCGCCCGCCGAGCGAGGCGAGGAGCCGccggcgcggcgcgcgcggcgcgagGACGACGGCGCGCTGGCGGCCGACATGCGCGACGCGGTGCAGCGCCTGCGCGCCGACAAGCTGCGGCCGCGCGCGGGCTCGCcgtcgccgccgccgccgcccgccgcgccgcccgaccGCGCCTAG
- Protein Sequence
- MISKVLWKPYDMCFSYDDMLYYALWRLPQEACEKAPASSSPNLAEQPLDLSAKSTSSTSGTPPPDSKHLDNRLKRAVLEGASNSSSRRGYTEEELQAAVRDILSGRLGTRRAALIYGIPRSTLRNKLNKLGSVVDHADSDNDSDADRADSPPSVILKIPTFPPPDDKSPSPAGQHQGPTAPITPMLPTGQGSLKPPSQLLLPPSVFADPPSTQHLFTSLSDVIAKSISQKFQQPLDRPHHQHQPSEMMYGRGPDRHVSVIKTPPDNQRYPAPGNSKQMPNNNGQPAAGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPPQDATKPQPPKPPPPKPPTKPFSNGLNGPEAPGYPPGYPFWPGSGFPPPPAPDLYASHMMRRLREEAPPPANGSFLEGIIRSSLERPALLQRLAAPAERGEEPPARRARREDDGALAADMRDAVQRLRADKLRPRAGSPSPPPPPAAPPDRA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00147216;
- 90% Identity
- iTF_00301091; iTF_00446027; iTF_00685347; iTF_01064556; iTF_01531886; iTF_01532944; iTF_00711747; iTF_00447037; iTF_01061805;
- 80% Identity
- -