Ncom019587.1
Basic Information
- Insect
- Noctua comes
- Gene Symbol
- Mblk-1
- Assembly
- GCA_963082995.1
- Location
- OY720289.1:3406070-3417661[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.5e-14 7.9e-11 42.1 0.0 1 36 79 115 79 119 0.93 2 2 5.3e-19 9.2e-16 57.9 0.0 1 43 291 334 291 336 0.95
Sequence Information
- Coding Sequence
- ATGTGTTTTAGTTATGATATGTTCTATTACGTGTTACAGAGGCTACCCCAGGAGGCGTGTGAGAAGGCGCCGGCGTCTTCATCCCCCAACCTGGCGGAACAGCCTTTGGACCTGAGCGCCAAGTCTACCTCCAGCACCAGTGGCACACCACCTCCTGACTCCAAGCATTTGGATAACAGATTGAAGCGAGCAGTTCTCGAGGGTGCCAGCAACAGCtctggtcgccgtgcgtacacCGAAGAGGAGCTCCAGTCAGCCGTACGGGACATCCAGTCGGGCCGGCTAGGCACCCGCCGCGCTGCCCTCATCTACGGTATCCCACGCTCTACGCTGCGCAATAAACTCAACAAGTTCGGCTCGGTCGTCGACCACGCCGACTCCGACAACGACAGCGATGCCGACCGCGCCGACTCGCCTCCCTCCGTCATCCTCAAAATACCCACATTCCCCCCACCCGACGACAAGAGCCCATCCCCAGCTGGACAACACCAAGGCCCCATAGCGCCTATAACACCGATGCTCCCCACGGTACAAGCCTCACTCAAGCCACCCTCACAGCTGCTGCTCCCGCCCTCGGTATTCGCCGACCCTCCCTCAACACAACACCTCTTCACGTCACTCAGTGACGTCATCGCTAAAAGCATCAGCCAAAAGTTCCAGCAACCTTTAGATAGGCCGCACCACCAGCACCAGTCTAGTGACCTGATGTATGCGCGAGGTCCTGACCGACACGTGTCTGTCATCAAGACTCCACCGGATAACCAGCGCTACCCCGCGCCCGGCAACTCCAAGCAGATGCCCAACAACAACGGGCAGCCGGTCGCCGGCGGCAAGGGCACGCGGCCCAAGCGCGGCAAGTACCGGAACTACGACCGCGACAGTCTGGTGGAGGCGGTGAAGGCGGTGCAGCGCGGGGAGATGTCCGTGCACCGCGCCGGCTCCTACTACGGCGTGCCGCACTCCACGCTCGAGTACAAGGTGAAGGAGCGCCACCTCATGCGGCCGCGCAAGCGCGAGCCCAAGCCGCCGCAGGACGCCAGCAAGCCGCAGCCGCCGAAGCCGCCGCCGCCCAAACCGCCGACGAAGCCGTTCTCTAACGGACTCAACGGGCCGGAAGCCCCGGGCTACCCTCCCGGCTACCCCTTCTGGCCGGGCAGCGGGTTCCCACCGCCGCCCGCCCCGGACCTGTACGCCTCGCACATGATGCGCCGGCTGCGCGAGGAAGCGCCGCCGCCCGCCAACGGCTCGTTCCTGGAGGGCATCATCCGCTCGTCGCTGGAGCGGCCGGCGCTGCTGCAGCGCCTGGCGGCCCCGCCGGCCGGGCGCGCGCCGGACGAGGAGCCGCCGGCGCGGCGCGCGCGGCTGGACAGCTCGGACCAGGCGCTGGCGGCGGAGATGCGCGAGGCGGTGCAGCGGCTGCGCGCCGACAAGCTGCGGCCACGTAACGGCACGCccacgccgccgcccgcgccgccgccggccGCGCCGCCCGACCGCGCCTAG
- Protein Sequence
- MCFSYDMFYYVLQRLPQEACEKAPASSSPNLAEQPLDLSAKSTSSTSGTPPPDSKHLDNRLKRAVLEGASNSSGRRAYTEEELQSAVRDIQSGRLGTRRAALIYGIPRSTLRNKLNKFGSVVDHADSDNDSDADRADSPPSVILKIPTFPPPDDKSPSPAGQHQGPIAPITPMLPTVQASLKPPSQLLLPPSVFADPPSTQHLFTSLSDVIAKSISQKFQQPLDRPHHQHQSSDLMYARGPDRHVSVIKTPPDNQRYPAPGNSKQMPNNNGQPVAGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPPQDASKPQPPKPPPPKPPTKPFSNGLNGPEAPGYPPGYPFWPGSGFPPPPAPDLYASHMMRRLREEAPPPANGSFLEGIIRSSLERPALLQRLAAPPAGRAPDEEPPARRARLDSSDQALAAEMREAVQRLRADKLRPRNGTPTPPPAPPPAAPPDRA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00147216;
- 90% Identity
- iTF_00302019;
- 80% Identity
- -