Xrho028396.1
Basic Information
- Insect
- Xestia rhomboidea
- Gene Symbol
- Mblk-1
- Assembly
- GCA_963853795.1
- Location
- OY970779.1:3621209-3631648[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-13 1.1e-10 42.1 0.0 1 36 75 111 75 115 0.93 2 2 1.8e-18 1.2e-15 57.9 0.0 1 43 287 330 287 332 0.95
Sequence Information
- Coding Sequence
- ATGATATACGTTGATGATTTACAGCAAAGGCTACCGCAGGAGGTGTGCGATAAGGCGCCGGCGTCTTCATCCCCCAACCTGGCGGAACAGCCCCTGGACCTTAGCGCCAAGTCTACCTCCAGCACCAGTGGCACACCACCTCCTGACTCCAAGCATTTGGATAACAGATTAAAGCGAGCAGTTCTCGAGAGTGCCAGCAACAGTTCTGGTCGCCGTGCGTACACTGAAGAGGAGCTCCAGTCAGCCGTGCGGGACATCCAGTCTGGCCGGCTGGGCACCCGCCGCGCCGCCCTCATCTACGGCATCCCGCGCTCCACGCTGCGCAACAAACTCAACAAATTCGGCTCCGTCGTCGACCACGTCGACTCTGACAACGACAGCGATGCCGACCGCGCCGACTCGCCTCCTTCAGTCATCCTCAAAATTCCCACATTCCCCCCACCCGACGACAAGAGCCCATCCCCAGCTGGACCACACCAAGGCCCCATAGCGCCCATAACACCGATGCTCCCTACGGGACAAGCCTCACTCAAGCCACCCTCGCAGCTTCTGCTCCCGCCCTCGGTGTTCGCCGACCCTCCCTCAACACAACACCTCTTTACGTCCCTAAGTGACGTCATCGCTAAAAGCATCAGCCAAAAGTTCCAGCAACCTTTAGATAGGCCGCACCACCAGCACCAGCCTAGTGAACTGATGTACGCACGAGGACCTGATCGGCACGTGTCTGTCATCAAGACTCCGCCGGACAACCAGCGCTACCCCGCGCCCGGCAACTCCAAGCAGATGCCCAACAACAACGGGCAGCCGGCCGCCGGCGGCAAGGGCACGCGGCCCAAGCGCGGCAAGTACCGGAACTACGACCGCGACAGTCTGGTGGAGGCGGTGAAGGCGGTGCAGCGCGGGGAGATGTCCGTGCACCGCGCCGGCTCCTACTACGGCGTGCCACACTCCACGCTCGAGTACAAGGTGAAGGAGCGCCACCTCATGCGGCCGCGCAAGCGCGAGCCCAAGCCGCCGCAGGACGCCGGCAAGCCGCAGCCGCCCAAGCCGCCGCCGCCCAAACCACCGACGAAACCGTTCTCCAACGGACTCAACGGGCCGGAAGCCCCGGGCTACCCTCCCGGCTACCCGTTCTGGGCAGGCAGCGGGTTCCCACCGCCGCCCGCCCCGGACCTGTACGCCTCGCACATGATGCGACGGCTGCGCGAGGAGGCGCCGCCGCCCGCCAACGGCTCGTTCCTGGAGGGCATCATCCGCTCGTCGCTGGAGCGGCCGGCGCTGCTGCAGCGCCTGGCGGCCCCGCCGGCCGGcgagcgccgcgccgcgccggacGAGGAGCCGCcggcgcggcgcgcgcgcctggACAGCTCGGACCAGGCGCTGGCGGCGGAGATGCGCGACGCGGTGCAGCGGCTGCGCGCCGACAAGCTGCGGCCGCGCAACGGCACGCCcacgccgccgcccgcgccgccgccggccgcGCCGCCCGACCGCGCCTAG
- Protein Sequence
- MIYVDDLQQRLPQEVCDKAPASSSPNLAEQPLDLSAKSTSSTSGTPPPDSKHLDNRLKRAVLESASNSSGRRAYTEEELQSAVRDIQSGRLGTRRAALIYGIPRSTLRNKLNKFGSVVDHVDSDNDSDADRADSPPSVILKIPTFPPPDDKSPSPAGPHQGPIAPITPMLPTGQASLKPPSQLLLPPSVFADPPSTQHLFTSLSDVIAKSISQKFQQPLDRPHHQHQPSELMYARGPDRHVSVIKTPPDNQRYPAPGNSKQMPNNNGQPAAGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPPQDAGKPQPPKPPPPKPPTKPFSNGLNGPEAPGYPPGYPFWAGSGFPPPPAPDLYASHMMRRLREEAPPPANGSFLEGIIRSSLERPALLQRLAAPPAGERRAAPDEEPPARRARLDSSDQALAAEMRDAVQRLRADKLRPRNGTPTPPPAPPPAAPPDRA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00147216;
- 90% Identity
- iTF_00302019;
- 80% Identity
- -