Dmen041139.1
Basic Information
- Insect
- Diarsia mendica
- Gene Symbol
- Mblk-1
- Assembly
- GCA_949316265.1
- Location
- OX438909.1:4556848-4571106[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.2e-14 4.7e-11 43.8 0.0 1 36 74 110 74 114 0.92 2 2 1.7e-18 1.9e-15 57.9 0.0 1 43 285 328 285 330 0.95
Sequence Information
- Coding Sequence
- ATGCAGGGGGCCTCGTGCTCGTGCTCGCTACCCCAGGAGGTGTGTGAGAAGGCGCCGGCGTCTTCATCCCCCAACCTGGCGGAGCAGCCCCTGGACCTCAGCGCCAAGTCTACCTCCAGCACCAGCGGCACACCACCTCCTGACTCCAAGCATTTGGATAACAGATTGAAGCGAGCAGTTCTCGAGAGTGCCAGCAACAGCTCAGGTCGCCGTACGTACACTGACGAGGAGCTGCAGGCAGCCGTGCGGGACATCCAGTCAGGTCGGCTGGGCACCCGCCGCGCAGCCCTCATCTACGGCATCCCGCGCTCCACGCTGCGCAACAAACTCAACAAGTTCGGCTCCGTCGTCGACCACAACGACTCCGACAACGACAGCGATGTCGATCGCGCCGACTCGCCCCCCTCCGTCATCCTCAAAATACCCACATTCCCCCCACCCGACGACAAGAGCCCATCCCCGGCTGGACAACACCAAGGCCCCATAGCGCCTATAACACCGATGCTCCCCGGGGGACAAGCCTCACACAAACCACCCTCACAGCTGCTGCTCCCACCCTCGGTGTTCGCCGACCCTCCCTCAACACAACACCTCTTCACGTCCCTCAGTGACGTCATCGCTAAAAGCATCAGCCAAAAGTTCCAGCAACCCTTAGATAGGCCGCACCACCAGCACCAGCCTAGTGACCTGATGTATGCGCGAGGTCCTGATCGACACGTGTCCGTCATCAAGACTCCGCCTGACAACCGCTACCCCGCGCCCGGCAACTCCAAGCAGATGCCCAACAACAACGGTCAGCCAGCTGCCGGCGGCAAGGGAACGCGGCCCAAGCGCGGCAAGTACCGCAACTACGACCGCGACAGTCTGGTGGAGGCCGTGAAGGCGGTGCAGCGCGGGGAGATGTCCGTGCACCGCGCCGGCTCCTACTACGGTGTGCCGCACTCCACGCTCGAGTACAAGGTGAAGGAGCGCCACCTCATGCGGCCACGCAAGCGCGAGCCCAAGCCGCCGCAGGAGCCCGGCAAGCCACAACCGCCCAAGCCGCAGCCGCCCAAACCGCCGACGAAACCGTTCACCAACGGCCTCAACGGGCCGGAAGCCCCGGGCTATCCTCCCGGTTACCCGTTCTGGCCGGGCAGCGGGTTCCCACCGCCACCCGCACCGGACCTGTACGCGTCGCACATGATGCGCCGACTGCGCGAGGAGGCGCCGCCGCCCGCCAACGGCTCGTTCCTGGAGGGCATCATCCGCTCGTCGCTGGAGCGGCCGGCATTGTTGCAGCGTCTGGCGGCGCCACCGGCCGGTGAACGCCGCGCCGCACCGGACGAGGAGCCGCCGGCGCGGCGCGCGCGGCTGGACAGCTCGGACCAGGCGCTGGCGGCGGAGATGCGCGAGGCGGTGCAGCGACTGCGCGCGGACAAGCTGCGACCACGCAACGGTACGCCAaccccgccgcccgcgccgccgccggccGCGCCTCCCGACCGCGCCTAG
- Protein Sequence
- MQGASCSCSLPQEVCEKAPASSSPNLAEQPLDLSAKSTSSTSGTPPPDSKHLDNRLKRAVLESASNSSGRRTYTDEELQAAVRDIQSGRLGTRRAALIYGIPRSTLRNKLNKFGSVVDHNDSDNDSDVDRADSPPSVILKIPTFPPPDDKSPSPAGQHQGPIAPITPMLPGGQASHKPPSQLLLPPSVFADPPSTQHLFTSLSDVIAKSISQKFQQPLDRPHHQHQPSDLMYARGPDRHVSVIKTPPDNRYPAPGNSKQMPNNNGQPAAGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPPQEPGKPQPPKPQPPKPPTKPFTNGLNGPEAPGYPPGYPFWPGSGFPPPPAPDLYASHMMRRLREEAPPPANGSFLEGIIRSSLERPALLQRLAAPPAGERRAAPDEEPPARRARLDSSDQALAAEMREAVQRLRADKLRPRNGTPTPPPAPPPAAPPDRA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00147216;
- 90% Identity
- iTF_00302019;
- 80% Identity
- -