Cpyg001662.1
Basic Information
- Insect
- Cephus pygmeus
- Gene Symbol
- bab1
- Assembly
- GCA_036026175.1
- Location
- JAYRBY010000123.1:421169-423214[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 8.7e-18 1.4e-14 54.0 0.0 1 43 28 71 28 73 0.95 2 3 1.2 1.9e+03 -0.8 0.9 6 15 151 160 148 163 0.86 3 3 6.4 1e+04 -3.2 0.1 3 11 190 198 190 198 0.82
Sequence Information
- Coding Sequence
- ATGTGGCAAAAGTGTTGGAACACCAATCAGAGCCTGGTGCACAATCTGCGCTTCCGGGAACGCGGACCGCTCAAGTCTTGGCGACCGGAAACCATGGCCGAGGCAATCTTCAGCGTTCTCAAGGAAGGACTGTCGCTCAGCCAAGCAGCAAGGAAATACGACATACCGTACCCAACGTTTGTCCTTTACGCGAATCGAGTTCACAACATGTTAGGTCCAAGCGCCGATGGCGGGGCCGATCTGCGTCCGAAGGGCCGAGGACGACCTCAGCGAATACTCCTCGGGGTCTGGCCGGACGAGCACATCCGGGGTGTCATAAGGGCGGTTGTGTTTCGCGACGGACACTCGCCGCACATCGTCAAGGAGGAGCCAGCATCCATGTATCCCAGTCTCGCGAATTACGCAGCCTGCAATGGACCGGAAGGTGCGGTGAGTCCCGGCACGGCAGCGGCAGCCGCGGTCGCAGCAGTGGCCCAAGGCCTCCGACATCAGATGTGCAGCATGGTGGCCGCAGCTCATTCCCACCAGCACGACATGATCGGTACGAATCTCTCCAGCAGCCTCTCGACGAACATCCAGGCGGCGATCCAGGCCCAGCATCatcacaacaacaacaacaacaataataacaatggcaACTCGCCGCTGAATTTGGGCCTGGCGAGTCCCGGCTCGGGTGGTCCGCCCGAGAGTCCCATGGAGAGTCCCCTGGCCAGTCCTCTGGGTCCTCTGATGGATCCCACCACGCACATACCCAGCAGCGTGGAGGTCGGGATCGGGGTCAGCGGGATGACCTACAAGCCGGCGCGCAGCTTCGTCAGTCCCAGACCGGAGAATCTCTTCCAGGAGGACATCGCCGACCTCGTGAAGAGCTCTCACGGCCTGAAGGACAAGGACAAGATACCCGTGAAGTTGGAACCGCTGACGGACTCGCGTTGCGAATAG
- Protein Sequence
- MWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGADLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDGHSPHIVKEEPASMYPSLANYAACNGPEGAVSPGTAAAAAVAAVAQGLRHQMCSMVAAAHSHQHDMIGTNLSSSLSTNIQAAIQAQHHHNNNNNNNNNGNSPLNLGLASPGSGGPPESPMESPLASPLGPLMDPTTHIPSSVEVGIGVSGMTYKPARSFVSPRPENLFQEDIADLVKSSHGLKDKDKIPVKLEPLTDSRCE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01474600;
- 90% Identity
- iTF_00253480;
- 80% Identity
- iTF_00294384;