Cpar001690.1
Basic Information
- Insect
- Cephus parvus
- Gene Symbol
- bab1
- Assembly
- GCA_030142435.1
- Location
- JARQTA010000134.1:422740-424793[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.1e-17 1.2e-14 54.0 0.0 1 43 28 71 28 73 0.95 2 3 1.4 1.7e+03 -0.8 0.9 6 15 151 160 148 163 0.86 3 3 8 9.2e+03 -3.2 0.1 3 11 190 198 190 198 0.82
Sequence Information
- Coding Sequence
- ATGTGGCAAAAGTGTTGGAACACCAATCAGAGCCTGGTGCACAATCTGCGCTTCCGGGAACGCGGACCGCTCAAGTCTTGGCGACCGGAAACCATGGCCGAGGCAATCTTCAGCGTTCTCAAGGAAGGACTGTCGCTCAGCCAAGCAGCAAGGAAATACGACATACCGTACCCAACGTTTGTCCTTTACGCGAATCGAGTTCACAACATGTTAGGTCCAAGCGCCGATGGCGGGGCCGATCTGCGTCCGAAGGGCCGAGGACGACCTCAGCGAATACTCCTCGGGGTCTGGCCGGACGAGCACATCCGGGGTGTCATAAGGGCGGTTGTGTTTCGCGACGGACACTCGCCGCACATCGTCAAGGAGGAGCCAGCATCCATGTATCCCAGTCTCGCGAATTACGCAGCCTGCAATGGACCGGAAGGTGCGGTGAGTCCCGGCACGGCAGCGGCAGCCGCGGTCGCGGCAGTGGCCCAAGGCCTCCGACATCAGATGTGCAGCATGGTGGCCGCAGCTCATTCCCACCAGCACGACATGATCGGTACGAATCTCTCCAGCAGCCTCTCGACGAACATCCAGGCGGCGATCCAGGCCCAGCATCAtcacaacaacaacaacaacaataataacaatggcaACTCGCCGCTGAATTTGGGCCTGGCGAGTCCCGGCTCGGGTGGTCCGCCCGAGAGTCCCATGGAGAGTCCCCTGGCCAGTCCTCTGGGTCCTCTGATGGATCCCACCACGCACATACCCAGCAGCGTCGAGGTCGGGATCGGGGTCAGCGGGATGACCTACAAGCCGGCGCGCAGCTTCGTCAGTCCCAGACCGGAGAATCTCTTCCAGGAGGACATCGCCGACCTCGTGAAGAGCTCTCACGGCCTGAAGGACAAGGACAAGATACCCGTGAAGTTGGAACCGCTGACGGACTCGCGTTGCGAATAG
- Protein Sequence
- MWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGADLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDGHSPHIVKEEPASMYPSLANYAACNGPEGAVSPGTAAAAAVAAVAQGLRHQMCSMVAAAHSHQHDMIGTNLSSSLSTNIQAAIQAQHHHNNNNNNNNNGNSPLNLGLASPGSGGPPESPMESPLASPLGPLMDPTTHIPSSVEVGIGVSGMTYKPARSFVSPRPENLFQEDIADLVKSSHGLKDKDKIPVKLEPLTDSRCE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01474600;
- 90% Identity
- iTF_00253480;
- 80% Identity
- iTF_00295926; iTF_00291451;