Basic Information

Insect: Celastrina argiolus
Gene Symbol: -
Assembly: GCA_905187575.1
Location: LR994600.1:160451-163778[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 5.9e-06 0.00061 20.7 2.9 1 23 85 107 85 107 0.98

2 18 0.068 7 8.0 5.1 1 23 114 136 114 136 0.97

3 18 4.2e-05 0.0044 18.0 2.5 1 23 142 164 142 164 0.96

4 18 2.2e-05 0.0022 19.0 1.6 1 23 170 192 170 192 0.97

5 18 0.00016 0.017 16.2 0.6 1 23 198 220 198 220 0.98

6 18 0.00072 0.074 14.2 3.4 1 23 228 250 228 250 0.97

7 18 4e-06 0.00042 21.3 3.5 1 23 256 278 256 278 0.99

8 18 4.8e-05 0.005 17.9 0.2 1 23 288 310 288 310 0.97

9 18 0.036 3.7 8.8 0.2 1 23 319 341 319 341 0.97

10 18 0.00042 0.043 14.9 4.4 1 23 347 369 347 369 0.97

11 18 0.0025 0.25 12.5 1.2 1 23 375 397 375 397 0.97

12 18 0.31 32 5.9 0.2 1 11 405 415 405 419 0.90

13 18 4.1e-06 0.00043 21.2 3.2 1 23 434 456 434 456 0.99

14 18 0.00065 0.067 14.3 8.2 1 23 462 484 462 484 0.99

15 18 6.6e-05 0.0069 17.4 4.0 1 23 490 512 490 512 0.98

16 18 3.9e-07 4e-05 24.5 1.9 1 23 518 540 518 540 0.99

17 18 4.9e-07 5.1e-05 24.1 0.3 1 23 548 570 548 570 0.97

18 18 8.6e-07 8.9e-05 23.4 1.6 1 23 576 598 576 598 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	5.9e-06	0.00061	20.7	2.9	1	23	85	107	85	107	0.98
2	18	0.068	7	8.0	5.1	1	23	114	136	114	136	0.97
3	18	4.2e-05	0.0044	18.0	2.5	1	23	142	164	142	164	0.96
4	18	2.2e-05	0.0022	19.0	1.6	1	23	170	192	170	192	0.97
5	18	0.00016	0.017	16.2	0.6	1	23	198	220	198	220	0.98
6	18	0.00072	0.074	14.2	3.4	1	23	228	250	228	250	0.97
7	18	4e-06	0.00042	21.3	3.5	1	23	256	278	256	278	0.99
8	18	4.8e-05	0.005	17.9	0.2	1	23	288	310	288	310	0.97
9	18	0.036	3.7	8.8	0.2	1	23	319	341	319	341	0.97
10	18	0.00042	0.043	14.9	4.4	1	23	347	369	347	369	0.97
11	18	0.0025	0.25	12.5	1.2	1	23	375	397	375	397	0.97
12	18	0.31	32	5.9	0.2	1	11	405	415	405	419	0.90
13	18	4.1e-06	0.00043	21.2	3.2	1	23	434	456	434	456	0.99
14	18	0.00065	0.067	14.3	8.2	1	23	462	484	462	484	0.99
15	18	6.6e-05	0.0069	17.4	4.0	1	23	490	512	490	512	0.98
16	18	3.9e-07	4e-05	24.5	1.9	1	23	518	540	518	540	0.99
17	18	4.9e-07	5.1e-05	24.1	0.3	1	23	548	570	548	570	0.97
18	18	8.6e-07	8.9e-05	23.4	1.6	1	23	576	598	576	598	0.97

Sequence Information

Coding Sequence: ATGGAGGTGTTGTCTGTGGTGGAGGAGCATGTGTCTCTGGAGCAGCTGGTGGGGGATCTGTTTCCGGATACTGATGAACCATTGCCGATACACGATTTTGCCGACATGGAGCTGAGCCTTACGCAAAGCGCTTTCACGAAACCCGCCGAGTTCGTCACAGAACAGAAGAGGACAGAAAGTCTGAAGTCCAGTGGGAGCGAGAAGAAAGATTTCAAATTTTTCTTCGCGAAAGACAAGGACAGCAAGAAGCTATTCTCCTGCGATGTTTGCGGCTTAAGGTTCTCTTACAGGAGCTATCTCAACAAGCACAAGAAGAAGCACAGCGGAGAAGACAGCCTCTATAGCTGCGATCGATGCTACCTCAAGTTCCCCTCGCATAAACTACTGAAGCAACACAAAACAAAACACACCGTAACGTTTCATCACTTCTGCAGCATTTGTGATGCCAAATTCACCTCCAAAAGTGGACTGAAAGTGCACAAAAGACTGCACGCGGGCGAAAGGCCGTTTATATGTGACTCGTGTCCCAAGAAATTCACTTCTAAGGCGTATTTGGAGAAACATAAAAAACTGCACTCCGCGGACAAGTGTTATGCGTGCAATGTATGCGGCAAACGCTTCTCAGCCGATCTGTCCTTGAAGATACATAAACGAAAACATGCGGTGAAGAGCACCAGAAACCACTACTGCGATATATGCATGAAGAAGTTCACGTCAGAGAGCTATCTCAAGATCCACAAGAAGATCCACGCAGGGAACAGAGTGTTCAAATGCAAAGTGTGCAAGAAAACATTCAGTTCAGAGATATACTTAAAGATACACAGACGAAAGCATGCCCTGCCTAAATCCGATACCTCATTATATACATGTGACGTGTGCGATAAGGAATTCAAGTCTGAAAGCGTTCTGGAGATACACAAAACGGTTCACACCACGCATATAGATAAACCGGCTTTTGAATGCGAACTTTGCGGAGTCAGACTACCCACCAAGGATATATTAGAACGCCACAAGTACAAACACGATGAGAAGAGCCTACACAAATGTACCGTTTGTTACAAGATGTTCGCGTCTCGGAGATATTTGAACATACATTACAAACAACATCCCGACGATAGACCGTTCTCCTGTGATGTTTGCTACATGAGATTCTCACTGAACAAGTATCTGATCGCCCACAAAAAACTCCACAAGGGCGAGAAGATAAAGCTATACGACTGCAACATTTGCCATGAGAAATTCACCGCGAAAATATTGCCGGAACACAAAATAACGCACAAACTACTAGAGGACAGACCGTACAAATGTGACATTTGCAATCTCAACTTCACATCAAGCACACACCTGAAGTTACACCAGAAAATACACACACGCACCACTGTATACAAATGCGAACACTGCTCAATGACCTTCGAACAGCAATGGCATCTACACAAACACGAAAAGAAACATACAGACGAGAAACCGTACACGTGCGACATCTGCCACATGCGTTTTCGCTACAAAAGCCACGTGCAAGTCCACGTTCAGATACACATGAACGCGAAACCGTACCGCTGCAAGGTCTGCTTCAGACGGTTCCCCAACAACAGCGGTTTGAAGCGCCACATGCTCACTCACAAGAAGGCCATAGACAAGCCTCACGAGTGCGATGTCTGTGGTCAGGCGTTCGTGCGCAATAGCGACCTGAAGCGGCATGCGCGGGCGCACACCGGGGAGAGGCAGTACCCGTGTGACCGGTGCCCCAAGAAGTTCTCGCAGAACAGCAACCTGTTGAGGCATAAGAAGTTGCACGAGACGGACTCTACTTAG
Protein Sequence: MEVLSVVEEHVSLEQLVGDLFPDTDEPLPIHDFADMELSLTQSAFTKPAEFVTEQKRTESLKSSGSEKKDFKFFFAKDKDSKKLFSCDVCGLRFSYRSYLNKHKKKHSGEDSLYSCDRCYLKFPSHKLLKQHKTKHTVTFHHFCSICDAKFTSKSGLKVHKRLHAGERPFICDSCPKKFTSKAYLEKHKKLHSADKCYACNVCGKRFSADLSLKIHKRKHAVKSTRNHYCDICMKKFTSESYLKIHKKIHAGNRVFKCKVCKKTFSSEIYLKIHRRKHALPKSDTSLYTCDVCDKEFKSESVLEIHKTVHTTHIDKPAFECELCGVRLPTKDILERHKYKHDEKSLHKCTVCYKMFASRRYLNIHYKQHPDDRPFSCDVCYMRFSLNKYLIAHKKLHKGEKIKLYDCNICHEKFTAKILPEHKITHKLLEDRPYKCDICNLNFTSSTHLKLHQKIHTRTTVYKCEHCSMTFEQQWHLHKHEKKHTDEKPYTCDICHMRFRYKSHVQVHVQIHMNAKPYRCKVCFRRFPNNSGLKRHMLTHKKAIDKPHECDVCGQAFVRNSDLKRHARAHTGERQYPCDRCPKKFSQNSNLLRHKKLHETDST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01178857; iTF_00744957; iTF_00935011; iTF_01217676; iTF_00404022; iTF_00164572; iTF_00934045; iTF_01248395;
90% Identity: -
80% Identity: -